PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy022589

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

DBB

Protein Properties

Length: 263aa MW: 28863.6 Da PI: 4.654

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59526024	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.6	4.4e-07	23	66	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 + C+ +++ + l+C+ ++ lC +C e H+ Ht++ Ahy022589 23 PSPCDYCNSSRSVLYCRADSAKLCFKCDREVHSTnqlfskHTRT 66 568*****************************668888888876 PP
2	zf-B_box	21.4	5.2e-07	68	107	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ + + ++++ C + ++ lC++C e+H + H++ Ahy022589 68 LCDSCYDSPASILCSTESSVLCHNCDWESH-NlslptvHER 107 7*****************************.5577777765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50119	10.025	21	68	IPR000315	B-box-type zinc finger
SMART	SM00336	2.2E-11	21	68	IPR000315	B-box-type zinc finger
CDD	cd00021	7.25E-6	25	68	No hit	No description
PROSITE profile	PS50119	9.926	64	110	IPR000315	B-box-type zinc finger
SMART	SM00336	0.51	69	110	IPR000315	B-box-type zinc finger

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005622	Cellular Component	intracellular
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence Send to blast
MTGPHQNSTH SASHTQQDKA SAPSPCDYCN SSRSVLYCRA DSAKLCFKCD REVHSTNQLF 60 SKHTRTLLCD SCYDSPASIL CSTESSVLCH NCDWESHNLS LPTVHERGPL EGFTACPSVS 120 ELLTILGFED VGKKALLYGG DGGGGDGGGG EKNSADDFMG CEIEGFSDFF VWDAPSVVSL 180 DDLISSSAPS HNFQAMEVPP LPKNRKSSCG RHREEILSQL RELAKSEPLD LDTEQQQYLQ 240 SGNMSTDLEH DFKTDKFPSY EWX

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016205133.1	0.0	zinc finger protein CONSTANS-LIKE 13
Refseq	XP_025662403.1	0.0	zinc finger protein CONSTANS-LIKE 13
TrEMBL	A0A444YIB2	0.0	A0A444YIB2_ARAHY; Uncharacterized protein
STRING	XP_007163062.1	1e-113	(Phaseolus vulgaris)