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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Ahy022700 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | ERF | ||||||||
| Protein Properties | Length: 173aa MW: 19387.2 Da PI: 8.2488 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 28.6 | 3.6e-09 | 100 | 126 | 29 | 55 |
AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55
r++lg+f taeeAa+a++a +++++g
Ahy022700 100 VRVWLGTFSTAEEAARAYDAEARRIRG 126
79***********************98 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51032 | 13.564 | 64 | 134 | IPR001471 | AP2/ERF domain |
| SMART | SM00380 | 3.1E-13 | 93 | 140 | IPR001471 | AP2/ERF domain |
| Gene3D | G3DSA:3.30.730.10 | 1.3E-17 | 98 | 135 | IPR001471 | AP2/ERF domain |
| SuperFamily | SSF54171 | 2.75E-11 | 98 | 135 | IPR016177 | DNA-binding domain |
| CDD | cd00018 | 2.63E-17 | 99 | 135 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 173 aa Download sequence Send to blast |
MEKEGRPTLE RGASTLKTTP EFPTFPFHFD LPMDTEANAD GYDMKAHPQI RLSFSLTECM 60 SSARNPGLLP PTXGTHTELN GWPHNETRSL PGQGLGEXGV RVWLGTFSTA EEAARAYDAE 120 ARRIRGKKAK VNFPEEVPAA SSKRFKPHPE MQLPKEKMNC AKPKLNNQMF DFX |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G53910.2 | 3e-06 | related to AP2 12 | ||||




