PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy022755

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

G2-like

Protein Properties

Length: 384aa MW: 43028.4 Da PI: 9.7505

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59550240	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.9e-32	195	248	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Ahy022755 195 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 248 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.97E-15	192	248	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.0E-28	193	248	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.5E-23	195	248	IPR006447	Myb domain, plants
Pfam	PF00249	2.5E-7	196	247	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence Send to blast
MELFPAQPDL SLQISPPTGN GTAKQQEVDL GFWKRALDSS RTSFSSSSSP SPSSLPKPTS 60 YFDLSLSNPR PSPSSHYFNN TATTTPTNNH NLLFQSLQYY HHHHHPLLQP QPQSQPHTLS 120 QELGFLRPIR GIPVYQNPPS LPFPQHHHHH HHLLEPSSPP TTANAGASTH HFQSQALMRS 180 RFLSRFPAKR SMRAPRMRWT TTLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK 240 SHLQMYRTVK TTDRAAASSG QSDVYDNRSS GDTSEDIMFD INSPSTRRSD LSVKQGRTDN 300 NNNNNHLNQD KEYRGLWSNS SREAWLHGKP KLDSVGNNVH SLEKEMDPKC VSYERISDGS 360 SSSNVSASTS PKKPNLDLEF TLGX

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence Send to blast

MELFPAQPDL SLQISPPTGN GTAKQQEVDL GFWKRALDSS RTSFSSSSSP SPSSLPKPTS  60
YFDLSLSNPR PSPSSHYFNN TATTTPTNNH NLLFQSLQYY HHHHHPLLQP QPQSQPHTLS  120
QELGFLRPIR GIPVYQNPPS LPFPQHHHHH HHLLEPSSPP TTANAGASTH HFQSQALMRS  180
RFLSRFPAKR SMRAPRMRWT TTLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK  240
SHLQMYRTVK TTDRAAASSG QSDVYDNRSS GDTSEDIMFD INSPSTRRSD LSVKQGRTDN  300
NNNNNHLNQD KEYRGLWSNS SREAWLHGKP KLDSVGNNVH SLEKEMDPKC VSYERISDGS  360
SSSNVSASTS PKKPNLDLEF TLGX

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	3e-16	196	250	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	3e-16	196	250	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	3e-16	196	250	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	3e-16	196	250	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	3e-16	196	250	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	3e-16	196	250	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	3e-16	196	250	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	3e-16	196	250	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269\|PubMed:11525739, ECO:0000269\|PubMed:15286295, ECO:0000269\|PubMed:16623911, ECO:0000269\|PubMed:17307928}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025651234.1	0.0	probable transcription factor KAN2 isoform X1
Refseq	XP_025697885.1	0.0	probable transcription factor KAN2 isoform X1
Swissprot	Q9C616	5e-90	KAN2_ARATH; Probable transcription factor KAN2
TrEMBL	A0A444WVP7	0.0	A0A444WVP7_ARAHY; Uncharacterized protein
STRING	XP_007158256.1	1e-155	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	9e-77	G2-like family protein

Publications ? help Back to Top
Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis. Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71 [PMID:26108442]