PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe0352s0001.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 137aa    MW: 15643.8 Da    PI: 10.8226
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe0352s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.82.4e-095496257
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--S CS
                WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHn 57
                        +D y W+KYGqK+vkgse++             kkk++rs+ d+++ ei+Y+g H 
  Aqcoe0352s0001.1.p 54 EDVYYWKKYGQKQVKGSEYS------------QKKKIKRSH-DGQIREIIYKGGHY 96
                        7*****************96............59*******.*************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-83898IPR003657WRKY domain
SuperFamilySSF1182905.1E-94998IPR003657WRKY domain
SMARTSM007744.2E-753100IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MTSSIVVLLQ YNLPLRTSDT GTASSFGRHR VTTARGRRRT RIISSHTVTG RPSEDVYYWK  60
KYGQKQVKGS EYSQKKKIKR SHDGQIREII YKGGHYYHPM AQPSRRSVRG STYALSEMGS  120
EGRNESMEEK LLFLIL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011621822.23e-20probable WRKY transcription factor 20
TrEMBLA0A2G5CF528e-30A0A2G5CF52_AQUCA; Uncharacterized protein
TrEMBLA0A2G5CF689e-30A0A2G5CF68_AQUCA; Uncharacterized protein
TrEMBLA0A2G5CFA06e-30A0A2G5CFA0_AQUCA; Uncharacterized protein
TrEMBLA0A2G5CFC98e-30A0A2G5CFC9_AQUCA; Uncharacterized protein
STRINGAquca_058_00185.11e-30(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.16e-15WRKY DNA-binding protein 4