PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G014000.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 751aa    MW: 83288.4 Da    PI: 8.6869
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G014000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.65.2e-075597347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       +WT +E+e + +a +q G++ ++ I  +++  +   q++++++ +
  Aqcoe1G014000.2.p 55 AWTRQEEECFFNALRQVGKN-FDMITCRVQ-SKNKDQVRHYYYRL 97
                       6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-947102IPR009057Homeodomain-like
PROSITE profilePS5129310.60551102IPR017884SANT domain
SMARTSM007175.1E-452100IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.8E-454100IPR009057Homeodomain-like
CDDcd001673.47E-45598No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 751 aa     Download sequence    Send to blast
MESSLVTLGC EGEARLPSLV DQLNTDGESA VTSSSSPTIA DSHQPAKKQT RQWAAWTRQE  60
EECFFNALRQ VGKNFDMITC RVQSKNKDQV RHYYYRLVRR MNKLLGPEFS LDAKNSKDTN  120
AAMLRWWSLL EKYSCKASKL HLKPRRFKIF IEALEHQLLK DRKKTTRKRP SQNENSSSSS  180
APTPLQSKAS GHDTRLVKLV LVDSQNIQKV ASRKGSLMKR SFNNGTNRSN SKGDLSTVKT  240
TRQRRKTGGA SSAAYKRWEK AAIAGVSLVA DAAEHLERTT INKNAFPDQG STDELFSSTM  300
VPAKATDGQT VNDSFRDNPS HASVRASSQH QVAETSGQPN MKLKLQLFPI DEATRTALEK  360
GEHNPHLELT LSARKKITSV LEHLNRKWSK SSIASGQLIL FPYSAQRDNL ACHQRWTQDT  420
LASAADVYAS IGSPHVFRLR YGWFSSAEVA SVTSKSPSAL LYHQDENMNL NICNSKEQTE  480
DPPTAAMPDR HLTDDSKLLM EPYKNQPTSV TKGAELIPSS TDCPEDMIGY VGGRPENKRS  540
REDVPKAPWL RKQTGEGINR RQWKDVDNLR TSTGASLSAG DWADSLTNIS IGELLTEASR  600
METNGKEPPL VGSPQLLQQI PFSCDSFDAA IAAHIAGRQK IPGPPAVPMA HVPSIWDAEE  660
TCDAFSFRKI PSPKEDSGPS LPSNSSLETC KPISTASVCF KDFVEEFTET RTTENLLSER  720
LSIDTYESDA KEPSESFKDL GGLTDIYWTL *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241825.10.0PREDICTED: TSL-kinase interacting protein 1
RefseqXP_010241826.10.0PREDICTED: TSL-kinase interacting protein 1
RefseqXP_010241827.10.0PREDICTED: TSL-kinase interacting protein 1
TrEMBLA0A2G5ECA90.0A0A2G5ECA9_AQUCA; Uncharacterized protein
STRINGAquca_009_00130.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.20.0TSL-kinase interacting protein 1