PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G017700.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 393aa MW: 43488.5 Da PI: 6.7308

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G017700.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100	1.5e-31	231	285	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHerFve+v+ LGG++kAtPk il+lm+ +gLt+ hvkSHLQkYR+ Aqcoe1G017700.1.p 231 KTRIRWTQDLHERFVECVNCLGGADKATPKGILKLMDSDGLTIFHVKSHLQKYRM 285 68****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.4E-17	229	285	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.8E-29	229	286	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.3E-23	231	286	IPR006447	Myb domain, plants
Pfam	PF00249	2.0E-6	235	284	IPR001005	SANT/Myb domain
Pfam	PF14379	1.2E-20	316	361	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence Send to blast
MNTQKIGCYP LEFSGCSTDN SHPWPWNMGV CCQSSSSASQ AGLQLSNLGS ANSFTVASDH 60 LGSEASVFNT AEHYYQLGTP MFSQLPKSNT YISSHSPFED YLPVESERGV DFDIQSRDTL 120 QSIVKYSLPN NQNPRPSENS YRTCRSLLGS EHSSPWQNKL VIDNAALNRK NPSNPSEGSH 180 NTRVAYNPFA SELDPPSFQL IPDKQSAQTS PGVISYTSAS PVSSRAAVSN KTRIRWTQDL 240 HERFVECVNC LGGADKATPK GILKLMDSDG LTIFHVKSHL QKYRMAKYIP ESAEGKSDKK 300 VPTSDTIKLD PKAGLHIAEA LRLQLDVQMR LHEQLEIQRN LQVRIEEQGK QLKKMFDQQA 360 KNSDLMCPDV QSTNQEDVSL EVSADKLASQ NT*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence Send to blast

MNTQKIGCYP LEFSGCSTDN SHPWPWNMGV CCQSSSSASQ AGLQLSNLGS ANSFTVASDH  60
LGSEASVFNT AEHYYQLGTP MFSQLPKSNT YISSHSPFED YLPVESERGV DFDIQSRDTL  120
QSIVKYSLPN NQNPRPSENS YRTCRSLLGS EHSSPWQNKL VIDNAALNRK NPSNPSEGSH  180
NTRVAYNPFA SELDPPSFQL IPDKQSAQTS PGVISYTSAS PVSSRAAVSN KTRIRWTQDL  240
HERFVECVNC LGGADKATPK GILKLMDSDG LTIFHVKSHL QKYRMAKYIP ESAEGKSDKK  300
VPTSDTIKLD PKAGLHIAEA LRLQLDVQMR LHEQLEIQRN LQVRIEEQGK QLKKMFDQQA  360
KNSDLMCPDV QSTNQEDVSL EVSADKLASQ NT*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	9e-24	231	288	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	9e-24	231	288	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	9e-24	231	288	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	9e-24	231	288	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	9e-24	231	288	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	9e-24	231	288	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	9e-24	231	288	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	9e-24	231	288	2	59	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010265860.1	1e-106	PREDICTED: myb family transcription factor PHL5-like
TrEMBL	A0A2G5ECV2	0.0	A0A2G5ECV2_AQUCA; Uncharacterized protein
STRING	Aquca_009_00165.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	2e-67	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe1G017700.1.p