PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G024700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 232aa    MW: 25914.3 Da    PI: 10.0764
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G024700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.8e-102975251
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
                HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51
                       r+ h+ +Er RR+ +++ f  L +llP+a   +  + + ++iL + ++YI
  Aqcoe1G024700.1.p 29 RERHKLAERERRKSMRELFLSLHSLLPHA---NTVRKEQSSILDEIIKYI 75
                       899**************************...99***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-111991IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.51E-72775No hitNo description
PROSITE profilePS5088812.1252778IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-72975IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-92992IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0033391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MTVEWNNDWE TVSSEGKSSG SNGAPIDARE RHKLAERERR KSMRELFLSL HSLLPHANTV  60
RKEQSSILDE IIKYIPLAAA RLRSLQNRKD SVPLNRSNKT ASPTIQVSDR KSSDSMNSSD  120
CDIRVAPEPS SSVAIRVRGD RVNVSLTDTK GTSQTLLLSV ILDELEAHNL ELVRSTHCRD  180
GSKVVHHSES KISDGLEKSP TLLKTRLQEL ACRLHKLRKS SALKRTFEQL D*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010246746.11e-114PREDICTED: uncharacterized protein LOC104589957
TrEMBLA0A2G5ED531e-165A0A2G5ED53_AQUCA; Uncharacterized protein
STRINGAquca_009_00234.11e-166(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41240.22e-06basic helix-loop-helix protein 100