PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G046800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 450aa    MW: 49968 Da    PI: 6.0305
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G046800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.2e-10164204545
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                        k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Aqcoe1G046800.1.p 164 KTLRRLAQNREAARKSRLRKKAYVQQLETSRLKLTQLEQEL 204
                        788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.6E-8155207No hitNo description
SMARTSM003381.6E-9160223IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.37162206IPR004827Basic-leucine zipper domain
PfamPF001705.3E-7164204IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-7164207No hitNo description
CDDcd147082.01E-22164215No hitNo description
PROSITE patternPS000360167182IPR004827Basic-leucine zipper domain
PfamPF141449.1E-32247321IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MPMPTYVPLS HTLGTDRTNI DNRAFDIGAP DQAFRLQVED IVDFSIDPLF NPAKSSGLAV  60
TSYPQEFDTS NKLQEPYNIT PPTAGVGSQR FPSQKQPQVD PVILSSGHIE NWGESIMAEA  120
SPRTDTSTDV ETEEKNQRFE IVQSAGLGAS DSSDRSKERT GDQKTLRRLA QNREAARKSR  180
LRKKAYVQQL ETSRLKLTQL EQELQRARQQ GLFISNSGDQ SHSTNGNGAL AFDIEYSRWL  240
EEHNRQANEL RAAVNSHAGD GELRIIVDGI MGHYDEIFKL KGVAAKADVF HMLSGMWKTP  300
AERCFLWLGG FRSSELLKLL VNHLEPLTEQ QLMGICELQQ SSQQAEDALS QGMEALQQSL  360
AETLASGSPG TSGTSGNVAN YMGQMAMAMG KLETLEGFLH QADNLRQQTL QQMHRILTTR  420
QSARALLAIT DYFSRLRALS SLWLARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010245498.10.0PREDICTED: transcription factor TGA2.2-like isoform X2
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A2G5EDJ20.0A0A2G5EDJ2_AQUCA; Uncharacterized protein
STRINGAquca_009_00424.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-152TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]