PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G058100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 470aa    MW: 53279.6 Da    PI: 5.3197
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G058100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM131.85.1e-41391662126
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        ppG+rF P+d+el+ +yL++k+ ++kl++ + ++ v+iyk++P d+ +    ++++ ke+y F++rd+ky++g r+nra++ gyWkatg d+
  Aqcoe1G058100.1.p  39 PPGYRFAPQDHELIERYLRPKIYDQKLPI-NSFHMVNIYKFNPADIAAkykLHEKDGKELYLFTSRDRKYPNGFRPNRAADGGYWKATGADT 129
                        9****************************.78**************85232233355699******************************** PP

                NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmhey 126
                        ++++  +++l+g kktLvfy+g+ap+g+k++W+mhe 
  Aqcoe1G058100.1.p 130 PICKPkSTQLIGWKKTLVFYEGKAPNGVKSKWIMHEL 166
                        ***9856777*************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-4736197IPR003441NAC domain
PROSITE profilePS5100547.16138197IPR003441NAC domain
PfamPF023656.5E-2039166IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MEQHNDEQAV NHAEYLLSIT AAAANGDQEA SEKYLKTFPP GYRFAPQDHE LIERYLRPKI  60
YDQKLPINSF HMVNIYKFNP ADIAAKYKLH EKDGKELYLF TSRDRKYPNG FRPNRAADGG  120
YWKATGADTP ICKPKSTQLI GWKKTLVFYE GKAPNGVKSK WIMHELGLHD TNPRTKLPAH  180
PNNMRLDDWI LVKLYQKRKA KGKKRVDGQE DDGNIDIESP SDLDQDIVPP SDLGQDIVLP  240
ASVNSLEAGI DDDRRYEMNV ATGNENGQNQ AIEQYIQYHN PAGYNNNNIV YPENVQLVVP  300
NSVVMHEENH LTMPIMGADN YCGNISGILD SMVANNNSFG SQPIGSYYDP NPEEHFDMMN  360
NGNNFWSLDD PQMPHLDYFN NLLVDDYNDN PPLPTWDDQM QFPAGCYVSN LPMPPSNDKL  420
QLPAGCYNST LPMSPLVDDK QMLPDNNRPI PSSSDDNKLT KKRKRTKKQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-423819815169Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1460465KKRKRT
2460467KKRKRTKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2539550.0AC253955.1 Aquilegia coerulea clone COL08-M12, complete sequence.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-46NAC domain containing protein 32