PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G062600.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 342aa MW: 38555.7 Da PI: 5.3892

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G062600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37.3	8.9e-12	189	268	8	89
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk.vkkekdgkwevtkleleHnHel 89 ++vG v ++ks+ +g++ + f C + gkr+e+kk ++ r+r+++r++C l+ vk+ +d++w+v+ + +HnH+l Aqcoe1G062600.1.p 189 RSVGVVVIIKKSEFG-VSGRTSRLFFACERFGKRRENKKY--TSTRKRTSKRCDCPFLLRgVKMPQDDQWMVKVVCGHHNHQL 268 456666666665554.788899*************999..889999*******8466667*************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	6.1E-9	189	268	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MAEEEEEEEI AKASSFLQVN SSQFLEITCK SSGKVRRFSV GTEAGFAVQC INQKLDSGVL 60 LASYIEAVKE GEEPITFGPS SVLIDYGDGW KLQTVTNEGF EEEKLLEEPY KEFPDVIEPM 120 RDDVQSATDL EFHLIVPPLP EEIQAITSEP VSDVESQSFL KLDFTDAFST DEVFNSRDEL 180 IKWARDVGRS VGVVVIIKKS EFGVSGRTSR LFFACERFGK RRENKKYTST RKRTSKRCDC 240 PFLLRGVKMP QDDQWMVKVV CGHHNHQLGR HLQGSSVAGK LTPEEKEIVK HMLKTGVKPK 300 DILKALKERD QRNESTVRTI YNAQAKMRLE EMSAISQCNS S*

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MAEEEEEEEI AKASSFLQVN SSQFLEITCK SSGKVRRFSV GTEAGFAVQC INQKLDSGVL  60
LASYIEAVKE GEEPITFGPS SVLIDYGDGW KLQTVTNEGF EEEKLLEEPY KEFPDVIEPM  120
RDDVQSATDL EFHLIVPPLP EEIQAITSEP VSDVESQSFL KLDFTDAFST DEVFNSRDEL  180
IKWARDVGRS VGVVVIIKKS EFGVSGRTSR LFFACERFGK RRENKKYTST RKRTSKRCDC  240
PFLLRGVKMP QDDQWMVKVV CGHHNHQLGR HLQGSSVAGK LTPEEKEIVK HMLKTGVKPK  300
DILKALKERD QRNESTVRTI YNAQAKMRLE EMSAISQCNS S*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5EEA2	0.0	A0A2G5EEA2_AQUCA; Uncharacterized protein
STRING	Aquca_009_00551.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.4	8e-06	FAR1-related sequence 2

Link Out ? help Back to Top
Phytozome	Aqcoe1G062600.1.p