PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G126700.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 543aa    MW: 60489.1 Da    PI: 4.3873
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G126700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.88.5e-53161431128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+ +diyk+ePwdLp  +++k+++ ewyfFs  dkky +g r+nrat++gyWk+tgkd+
  Aqcoe1G126700.2.p  16 LAPGFRFHPTDEELVIYYLKRKVCGKPFRI-DAISVIDIYKLEPWDLPdrSRLKSRDLEWYFFSALDKKYGNGWRTNRATEQGYWKTTGKDR 106
                        579***************************.99**************95347788888********************************** PP

                NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +v + ++++vg+kktLvf+ grap+ge+t+Wvmheyrl
  Aqcoe1G126700.2.p 107 SVRR-GEKTVGMKKTLVFHIGRAPHGERTNWVMHEYRL 143
                        **99.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-638166IPR003441NAC domain
PROSITE profilePS5100558.23416166IPR003441NAC domain
PfamPF023654.8E-2818143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009644Biological Processresponse to high light intensity
GO:0009962Biological Processregulation of flavonoid biosynthetic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MGYKASSSSS TASSSLAPGF RFHPTDEELV IYYLKRKVCG KPFRIDAISV IDIYKLEPWD  60
LPDRSRLKSR DLEWYFFSAL DKKYGNGWRT NRATEQGYWK TTGKDRSVRR GEKTVGMKKT  120
LVFHIGRAPH GERTNWVMHE YRLVDEELSQ TGIAQDAFVL CRVFRKSGPG PKNGEQYGAP  180
FLEEEWDDNV VVPKSEFANE VFCGLGDDDH VQPLDEYAED HALAIIPQND VLVGTDGGDG  240
CNYIENSVST SEEDHKFLTG TGQNAGLQEL PDQKMYILPE QFQLDQTANG NDYFALSELL  300
NTADDNNLSE GPFDGEPTYS DARQGLSVND LNASEADENP CDMFGEYLNF FDAADTDSNL  360
MALNPSEFLD FEDPYLDQLI FTEEKMQAFP TLQESPELPG DEGASSSEQK PEVAKVAEDV  420
QYKRWSIAQQ IHDILGDIAA PSAYAAEIPT KEASCGQNSA ARSTSSVHVT ATIHHISETP  480
VIGGEKMLAN RVTIGLSFGW MGDTQSSKAP AMILRSGFYL MFFWFLSFLS MSCKHGSIIY  540
TR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-481516616165NO APICAL MERISTEM PROTEIN
1ut4_B5e-481516616165NO APICAL MERISTEM PROTEIN
1ut7_A5e-481516616165NO APICAL MERISTEM PROTEIN
1ut7_B5e-481516616165NO APICAL MERISTEM PROTEIN
4dul_A5e-481516616165NAC domain-containing protein 19
4dul_B5e-481516616165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00059PBMTransfer from AT5G04410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243196.11e-161PREDICTED: NAC domain-containing protein 53-like isoform X2
TrEMBLA0A2G5D0U90.0A0A2G5D0U9_AQUCA; Uncharacterized protein
STRINGAquca_030_00013.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-113NAC domain containing protein 2