PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G137200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family TCP
Protein Properties Length: 216aa    MW: 23493.2 Da    PI: 8.245
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G137200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP108.69.2e-3446113673
                TCP   6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 
                        ++ s++hTkv+g++RRvR++a+caar+F+L++eLG+++d++tieWLl  a+p+i+++tgt++++++  
  Aqcoe1G137200.1.p  46 KPRSDRHTKVNGKGRRVRIPALCAARIFQLTRELGHKSDGETIEWLLHHAEPSIIAATGTGTTPSEPI 113
                        678*********************************************************88888443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136924.26848102IPR017887Transcription factor TCP subgroup
PfamPF036343.4E-2748116IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MDFPSLRQHP PSSFSSHQNI RSLSPIPNPN SAISTQTTKT SRKITKPRSD RHTKVNGKGR  60
RVRIPALCAA RIFQLTRELG HKSDGETIEW LLHHAEPSII AATGTGTTPS EPISTSTGPI  120
PLTTTTFSSP PISSSVTVMA PIQPVSQTQI PTTELYSEEN NNSIGRLSLS PAFDYNNYNF  180
NNYNGNRMYT SMMLMDSPRN DGADDDDGFG ILCGV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002519510.12e-40transcription factor TCP11
TrEMBLA0A2G5D2691e-156A0A2G5D269_AQUCA; Uncharacterized protein
STRINGAquca_030_00105.11e-157(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72010.15e-34TCP family protein