PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G150000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 324aa    MW: 35834.5 Da    PI: 5.0583
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G150000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-1869119155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa+a++aa+++++g
  Aqcoe1G150000.1.p  69 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAVDAARAYDAAARAMYG 119
                        56*****999.**********8...3.35************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.27E-1869127No hitNo description
PfamPF008471.4E-1269119IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-2070127IPR016177DNA-binding domain
PROSITE profilePS5103221.89170127IPR001471AP2/ERF domain
SMARTSM003802.7E-3470133IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.2E-3170127IPR001471AP2/ERF domain
PRINTSPR003675.7E-107182IPR001471AP2/ERF domain
PRINTSPR003675.7E-1093109IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MSSDFPERKR KSRSRRNGPN SIAETLAKWK VLNNELESTK DGAKRRKVPA KGSKKGCMRG  60
KGGPDNSRCN YRGVRQRTWG KWVAEIREPN RGSRLWLGTF PTAVDAARAY DAAARAMYGS  120
CARLNLPGVV REYDMSKGSF SAETPSTSES TMTTSNHSGV YGGPEECSVK VECPKMETEH  180
CNAESNETQS QPAPTMYAVK KEVAEENVDA DNFNPFKGYN QEYLQDVSVD DMFDVEQLLR  240
TIESEPKNVP VPSEEYNFDS VQYGFSSGGQ FQEGGLSNLP YETHKSDANV VEGLYHMDEA  300
AAPAGMDYGY DFLNDSWSPD LGV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1670127260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010257031.14e-73PREDICTED: dehydration-responsive element-binding protein 2C-like
TrEMBLA0A2G5D1T80.0A0A2G5D1T8_AQUCA; Uncharacterized protein
STRINGAquca_030_00214.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.16e-39ERF family protein