PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G163300.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ZF-HD
Protein Properties Length: 191aa    MW: 20518.2 Da    PI: 5.6436
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G163300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer73.43.5e-231166558
        ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegee..gtaaalkCaACgCHRnFHRreve 58
                        YkeC+kNhAa++G ha+DGC E++++ +++  +++aal C ACgCH +FH +  +
  Aqcoe1G163300.2.p 11 YYKECQKNHAAAVGLHATDGCNEYINDGTTNssASSAALFCQACGCHPSFHNKVLV 66
                       6*************************977664456899*************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047705.2E-201164IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257746.0E-101263IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015663.6E-191263IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152321.5841264IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MEGGEGSFSE YYKECQKNHA AAVGLHATDG CNEYINDGTT NSSASSAALF CQACGCHPSF  60
HNKVLVQNDS KKKKVGNIKL KNNEESWLRM EKKLSALKML MMAEGGEGSL EVQVVDGNMY  120
CKVTEVAMVL AEKSMTPAGC SDPEVARKKA NDLSPESLQK PENGSPPAVI NQDDVIVCKN  180
NAEAYVVVHQ *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5D2F81e-138A0A2G5D2F8_AQUCA; Uncharacterized protein
STRINGAquca_030_00327.11e-136(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.11e-14mini zinc finger 2