PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G167500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 462aa    MW: 50597.3 Da    PI: 6.8475
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G167500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.6e-31239297259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Aqcoe1G167500.1.p 239 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 297
                        699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081133.109233299IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.5E-31233299IPR003657WRKY domain
SuperFamilySSF1182902.88E-26236299IPR003657WRKY domain
SMARTSM007741.4E-37238298IPR003657WRKY domain
PfamPF031069.9E-26240297IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MCSSFSHKME KDQGDLADIV RASGGVAGSA GAGGSSTSNK DKVDWRISTE LGNFQSVIKE  60
PIDNFGDPFS NMHDPLLHEL DIPSPSFFDR SNSLSHVKMN IEDNISPSSH HLSRTIFDES  120
MRRPTNNIFS RMLQISPNSK MSSNTTTSPC DMMSTVMASP RVATSSMTSC SSSSIETALK  180
SNNSPNTGCS IESVGMMQIS SPRNPGIKRR KSQAKKVVCI PAPAAANSSR PSSGEVVPSD  240
LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC SARKQVERSR TDPNMLVITY TSEHNHPWPT  300
QRNALAGSTR SQPPKNNAAS KRSTSPQTSM KLMNVKEEVQ ENANESMSIS VVDGSINVNP  360
STIKEEIVLE KPIDMGDQAD HLDTFNQNYR PASDLLDSNL HPDDFFADLG ELEYDPLNLL  420
FTEEFNGKSE EGRQNKALDP FSLFDWAGNN SMFGENKRGG L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-25211300280Disease resistance protein RRS1
5w3x_D4e-25211300280Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002269170.11e-162PREDICTED: probable WRKY transcription factor 14
TrEMBLA0A2G5D2S00.0A0A2G5D2S0_AQUCA; Uncharacterized protein
STRINGAquca_030_00369.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.14e-76WRKY DNA-binding protein 35