PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G184000.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Trihelix

Protein Properties

Length: 302aa MW: 33684.2 Da PI: 6.783

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G184000.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.3	1.1e-19	63	146	2	85
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 W+ qe++aL+++r++m+ ++ +g k lWe+vs++++e+g++r++ +C++k+e +++ yk+ + + + ++s+ +++f+ l Aqcoe1G184000.2.p 63 WQCQETMALLTIRSNMDAAFHAGTFKRLLWEDVSRQLAEQGYTRTAMKCRKKFEYIRTFYKNKMKVGQAAALRDSEIYRFFSIL 146 99***********************************************************99999999999999999999866 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	1.9E-12	62	129	No hit	No description
CDD	cd12203	1.45E-16	63	125	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence Send to blast
MEEELTKVLG FLKPHVESHE DQNVGLRRQQ MERSFCGTEV KQGLKGVDYG TEHVVKRKRE 60 HLWQCQETMA LLTIRSNMDA AFHAGTFKRL LWEDVSRQLA EQGYTRTAMK CRKKFEYIRT 120 FYKNKMKVGQ AAALRDSEIY RFFSILKELH SPVYGTTTTL PAINTRTHPV SIRFISSGKT 180 PSASDLEMPT NPTVASATTQ IGLSRVICSD SGGGPPVNND LTISEIDCGQ LLDPSVEKHQ 240 GLSLCLEKSN PPVNGGTDDE ASTVEEHQAL SVEDTKLYLC LEDYRGKDGS FVLSFPVNYL 300 G*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	9e-19	GT-2-like 1

Link Out ? help Back to Top
Phytozome	Aqcoe1G184000.2.p