PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G217000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ARR-B
Protein Properties Length: 246aa    MW: 27814.9 Da    PI: 9.4195
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G217000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like57.92.2e-18188237151
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                        k+r++Wt++LHe+F++a++ L    + +Pk+il lm+v gL++ +v+SHLQ
  Aqcoe1G217000.1.p 188 KTRVVWTSQLHENFLQALSIL-SMGRVVPKRILALMNVRGLSRGNVASHLQ 237
                        68*******************.99*************************** PP
2Response_reg571.1e-1928524106
                        EEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHH CS
       Response_reg  24 eevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpee 106
                        ++v++a+ g+ea+ +lk++d  +Dl++ D+ mpgmdG++ll+  r+   ++p +++++  e +++++ l+aGa+ f+ Kp  + +
  Aqcoe1G217000.1.p   2 KKVTTATGGREAISCLKKSDgqFDLVISDLYMPGMDGFQLLEIVRTVY-NIPFVFMSSDYELDLMERGLEAGARYFFQKPLTMMD 85 
                        689****************99*********************999988.*******************************87765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011027.473194IPR001789Signal transduction response regulator, receiver domain
SMARTSM004480.0015190IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.2E-15283IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521721.22E-21385IPR011006CheY-like superfamily
CDDcd001563.01E-20383No hitNo description
Gene3DG3DSA:3.40.50.23009.9E-21396No hitNo description
SuperFamilySSF466899.5E-14186243IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-17187238IPR009057Homeodomain-like
TIGRFAMsTIGR015579.0E-19188240IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MKKVTTATGG REAISCLKKS DGQFDLVISD LYMPGMDGFQ LLEIVRTVYN IPFVFMSSDY  60
ELDLMERGLE AGARYFFQKP LTMMDYENMW QFVYTENVEY FQGIYIEQGL PPPPPPPIFP  120
QDRSSSLSIS DDINRQGRNS SSSSSTSNGK KRRQDDGYDC KKQKRPYKKH GKEDQDLGKT  180
SAAVPLKKTR VVWTSQLHEN FLQALSILSM GRVVPKRILA LMNVRGLSRG NVASHLQVCL  240
IHSKE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DAW41e-106A0A2G5DAW4_AQUCA; Uncharacterized protein
STRINGAquca_024_00004.11e-107(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.16e-33response regulator 2