PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G224100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 472aa    MW: 53358.2 Da    PI: 7.479
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G224100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.81.8e-3194147255
            G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  Aqcoe1G224100.1.p  94 PRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 147
                        8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.62890150IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-2990148IPR009057Homeodomain-like
SuperFamilySSF466893.4E-1492148IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-2294149IPR006447Myb domain, plants
PfamPF002491.3E-895146IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MAERLQVSAD REESIGSDNE AQNPSPLSSQ KFSSFDLNEN ASSEEDESTT EGADPTSDAA  60
DKTMTSDTSS QNNETVDGIA RSSTIRQYVR SKMPRLRWTP DLHLSFVHAV ERLGGQERAT  120
PKLVLQLMNV RGLSIAHVKS HLQMYRSKKL DDSGQVLSQS SIPMQGGPNM YYQGSSHHHG  180
HFIDRMDPFV ASNMYESNHP RRTSQFPLYQ QPFDMKASIS RHQEWIFTQG SMIRPLSLRG  240
KDLGLMSSLS ETTFANDTNL SLNPHLFERR NTMTGNQPIR ASRFLEQKRW PPREFSHNVS  300
WAGGSSQNLS HKNWATSVST DMASTKQQSW WNQSNNSRLQ SSARDPIVIP DNVEPGFEPP  360
FRHESLWMKT DQSKHRSKEL VRTDGKLSID NKLKEKECLP NLQLSLTNNF EMENNEKARE  420
STNDINTALS LSLFPSSTRR PQETQPTTEQ LKDTSQCKTW MLQAASCCKA T*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-1895149458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-1895149458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-1895149458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-1895149458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-1895149458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-1895149458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-1895149458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-1895149458Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010274476.11e-107PREDICTED: uncharacterized protein LOC104609785
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.17e-39G2-like family protein