PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G225400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 317aa    MW: 35654.5 Da    PI: 10.0111
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G225400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.59.8e-1533124186
           trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        +W++++  +Liea  e++ +l+rg+l++++W+ev++++      + ++ +r+ +qCk++++ l+k+yk +k+     + +  s++p++++l+
  Aqcoe1G225400.1.p  33 CWSEEQSATLIEAWGERHLELNRGNLRQKHWQEVADAVndrhgsSIKKARRTDVQCKNRIDTLKKKYKVEKAKILASSGTFISKWPFYSRLD 124
                        7*************************************998887778889*********************999998999*********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.8E-2431125No hitNo description
PROSITE profilePS500906.0863496IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MDGETQTPPP PSSQPPPPPP PPTRTPLPIR EDCWSEEQSA TLIEAWGERH LELNRGNLRQ  60
KHWQEVADAV NDRHGSSIKK ARRTDVQCKN RIDTLKKKYK VEKAKILASS GTFISKWPFY  120
SRLDMLIGPN GSNKKQQQHL ALPAPPLPPP PPQLMSPSSN SPPLALPLPY HRRTTPSSSL  180
PHATVVPVAP RSKRPAPNPI PIGIDDSCFR RNYSAVAAAA AASSDSESSR SSEEESRRKD  240
EEVDGVKELA QAITKFGEIY EKVEQVKQRQ MVELEKQRME FMKNLEFQRM QLFMDWQVQL  300
EKIKRSKRST ASDVYG*
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010655525.11e-103PREDICTED: trihelix transcription factor ASIL1 isoform X4
SwissprotQ9LJG82e-32ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2G5DFD00.0A0A2G5DFD0_AQUCA; Uncharacterized protein
STRINGAquca_021_00219.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-64sequence-specific DNA binding transcription factors