PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G240500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

NZZ/SPL

Protein Properties

Length: 435aa MW: 47510 Da PI: 8.0297

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G240500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	24.9	3.7e-08	23	72	51	99
NOZZLE 51 taqqkqkkptlrgmgvaklerfiieeekkkl.vvatvgdtssvaaisnta 99 + + kqkk rg+gva+le+ ++eee+k+ +v + ts v ++s t+ Aqcoe1G240500.1.p 23 SKKPKQKKIPQRGLGVAQLEKIRLEEEQKNEaAVVGGTGTSIVGSSSSTS 72 4567899999*****************99884555555677777666554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	3.4E-6	25	91	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence Send to blast
MAQEENQRCS NNNSSGGGVV RVSKKPKQKK IPQRGLGVAQ LEKIRLEEEQ KNEAAVVGGT 60 GTSIVGSSSS TSPSSFVVLP LPKHHNISSS SLPFPSSSSP KELPPFKSNF RPKFEVFGQS 120 PTIPSCLQPP HPPFYGHNTS FGGGSTIVGG HSYFPSVLNS CEMSYDRECA KLHPGLMFHT 180 HMHNDLNPIG PSSTLNGMQK QHYHQEQSHS SKVNVATTIS SGLNVQIEPP SNQSYNSNYR 240 LTPWPENEKM IGTKRQWPFS LDNPSSPSNC NYPPLIPRIP RMDERPLASY ENGGALRFEA 300 GFSSFREGPS GFSAQQVDWK AGMPELNLKN NSKENVALDT VLSLGISTPA SSSTTKAKQP 360 LECPTSSYQE FSDFNTSTHQ EYYGDPLFRR GEPVQSQCMY NFFPPKTPQI GVLAANSGDQ 420 RVGISDCVDL DLKL*

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence Send to blast

MAQEENQRCS NNNSSGGGVV RVSKKPKQKK IPQRGLGVAQ LEKIRLEEEQ KNEAAVVGGT  60
GTSIVGSSSS TSPSSFVVLP LPKHHNISSS SLPFPSSSSP KELPPFKSNF RPKFEVFGQS  120
PTIPSCLQPP HPPFYGHNTS FGGGSTIVGG HSYFPSVLNS CEMSYDRECA KLHPGLMFHT  180
HMHNDLNPIG PSSTLNGMQK QHYHQEQSHS SKVNVATTIS SGLNVQIEPP SNQSYNSNYR  240
LTPWPENEKM IGTKRQWPFS LDNPSSPSNC NYPPLIPRIP RMDERPLASY ENGGALRFEA  300
GFSSFREGPS GFSAQQVDWK AGMPELNLKN NSKENVALDT VLSLGISTPA SSSTTKAKQP  360
LECPTSSYQE FSDFNTSTHQ EYYGDPLFRR GEPVQSQCMY NFFPPKTPQI GVLAANSGDQ  420
RVGISDCVDL DLKL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1J0R0C4	0.0	A0A1J0R0C4_AQUCA; SPOROCYTELESS-like EAR-containing protein 1
STRING	Aquca_005_00104.1	0.0	(Aquilegia coerulea)

Link Out ? help Back to Top
Phytozome	Aqcoe1G240500.1.p