PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G244700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 283aa    MW: 31590.5 Da    PI: 5.4808
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G244700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-19119170256
                AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                        +++GVr+++ +g+++AeIrd      k  r +lg++ taeeAa a+++a+++++g+
  Aqcoe1G244700.1.p 119 HFRGVRRRP-WGKYAAEIRDS---SrKGVRLWLGTYNTAEEAALAYDKAALRMRGP 170
                        69*******.**********3...2234**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.1E-30118178IPR001471AP2/ERF domain
CDDcd000185.16E-28119177No hitNo description
SMARTSM003802.1E-35119183IPR001471AP2/ERF domain
PfamPF008473.7E-14119169IPR001471AP2/ERF domain
PROSITE profilePS5103223.064119177IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-22119179IPR016177DNA-binding domain
PRINTSPR003679.0E-10120131IPR001471AP2/ERF domain
PRINTSPR003679.0E-10143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MAIDLEHRAA PDAILENVWA NFIAGSAPKD GAGNMPNFSE SWDKLPGLDR KDGPMELQKK  60
IPSLGRWVSM GTESWEELLD DFIPANNIKH TGNIEPELSG ESSAAKPSAV RVEKVTTRHF  120
RGVRRRPWGK YAAEIRDSSR KGVRLWLGTY NTAEEAALAY DKAALRMRGP RTFLNFPLEI  180
VAEALGGAHS GDLNCRPTRS QQSYTTQRNG SISSSPLCTE VSYNPRKRAA SEWDLPDELM  240
MMVEQPSWKR LNTMDDMFRN QGDVVEFQDL GNDYLESLLS TL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-26118180466ATERF1
3gcc_A3e-26118180466ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010260392.11e-115PREDICTED: ethylene-responsive transcription factor ERF091
TrEMBLA0A2G5EQI30.0A0A2G5EQI3_AQUCA; Uncharacterized protein
STRINGAquca_005_00139.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.14e-31ERF family protein