PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G254200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 275aa    MW: 30394.3 Da    PI: 9.7104
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G254200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-202777256
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  Aqcoe1G254200.1.p 27 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 77
                       69*******.**********8...557*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.6E-392790IPR001471AP2/ERF domain
PfamPF008476.0E-142776IPR001471AP2/ERF domain
PROSITE profilePS5103223.8942784IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-222785IPR016177DNA-binding domain
CDDcd000185.35E-182785No hitNo description
Gene3DG3DSA:3.30.730.102.7E-322784IPR001471AP2/ERF domain
PRINTSPR003676.1E-112839IPR001471AP2/ERF domain
PRINTSPR003676.1E-115066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MAPRERSNGG VKANKANGGG GDGTEVHFRG VRKRPWGRYA AEIRDPGKKS RVWLGTFDTA  60
EEAARAYDAA AREFRGAKAK TNFPIPSSSE NNNHNHNHLN LEILNNNINH SNNQSPSQSS  120
TVESSSREAP PPSAVVGGTP PLDLDLMHRG GGAGTVRFPF NQHHQRHPHQ VGVLPTNAAH  180
PLFYFDAIVR SDKMMMNQQH QYHQQQQSRL RFDPSATNFL HQQQQHHSMI NNNNNQSGVQ  240
SDSDSSSVVD YNHPSPPRRV LDFDLNFPPA PEVA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-212785261ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026393964.18e-74ethylene-responsive transcription factor 4-like
RefseqXP_026396826.17e-74ethylene-responsive transcription factor 4-like
TrEMBLA0A2G5CV740.0A0A2G5CV74_AQUCA; Uncharacterized protein
STRINGAquca_036_00070.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-22erf domain protein 9