PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G254500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 190aa    MW: 20877.2 Da    PI: 9.1441
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G254500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.72.2e-211161256
                AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a+++a+++l+g+
  Aqcoe1G254500.1.p 11 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDNAARSLRGN 61
                       69*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.22E-301167No hitNo description
SuperFamilySSF541716.02E-231168IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.1E-321169IPR001471AP2/ERF domain
PROSITE profilePS5103222.7611168IPR001471AP2/ERF domain
PfamPF008474.9E-141160IPR001471AP2/ERF domain
SMARTSM003802.5E-371174IPR001471AP2/ERF domain
PRINTSPR003675.7E-111223IPR001471AP2/ERF domain
PRINTSPR003675.7E-113450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MASSRVGGEG HYRGVRKRPW GRYAAEIRDP WKKTRVWLGT FDTPEEAALA YDNAARSLRG  60
NKARTNFPQP PLPPPPPPPT LEQLVQLNRG TCSTGSTLSL DLNDLPSLSP SSSDHNYNNG  120
HHHHHAGPST SLVLGHDFLH QTRSSSVSAV PKYEQVDLDQ VQPATFFGNT VRRGLCIDLN  180
QPPPPFWST*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-221168260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A7e-221168563ATERF1
3gcc_A7e-221168563ATERF1
5wx9_A1e-21668872Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00645PBMTransfer from LOC_Os05g41760Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849383.18e-46PREDICTED: ethylene-responsive transcription factor 12
RefseqXP_022777342.11e-45ethylene-responsive transcription factor 12-like
SwissprotQ94ID62e-38ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A2G5CV701e-137A0A2G5CV70_AQUCA; Uncharacterized protein
STRINGAquca_036_00073.11e-138(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.17e-36ERF domain protein 12