PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G292100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 289aa MW: 32442.6 Da PI: 6.7982

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G292100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.4	8.8e-30	67	120	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp LH++F++a++ LGG+e+AtPk+i ++m+++gLt++hvkSHLQ+YR+ Aqcoe1G292100.1.p 67 PRLRWTPVLHDHFLHAIRLLGGEERATPKQIWQTMDIDGLTISHVKSHLQMYRS 120 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.3E-27	63	122	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.76E-15	64	121	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.8E-23	67	121	IPR006447	Myb domain, plants
Pfam	PF00249	2.0E-5	68	119	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence Send to blast
MEEICELSLS FTKPQSTPFA SSSFLDLQLS LPDPTNTELN LQRLDGIVPE NSFLPGSVRS 60 YYRSKAPRLR WTPVLHDHFL HAIRLLGGEE RATPKQIWQT MDIDGLTISH VKSHLQMYRS 120 MKHEKMIQDE ARAERRLASM SNYTSNPHPT YSPLHDHSKK IKIAGNNNDA HSDLHLGQNH 180 PGIVRAPEGQ DKQGAGKEKN VLYNTQKDLC RSCPPPDRVI VIDDDDDDQP NTFVNASSKL 240 YRSEDLPKSA ADEDIDDMLS LSLFSKGFKA LKPMNKLTED GKKLSLGI*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-17	68	123	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-17	68	123	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-17	68	123	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-17	68	123	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-17	68	123	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-17	68	123	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-17	68	123	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-17	68	123	4	59	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5CBX4	0.0	A0A2G5CBX4_AQUCA; Uncharacterized protein
STRING	Aquca_066_00001.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	6e-25	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe1G292100.1.p