PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G297600.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

C2H2

Protein Properties

Length: 161aa MW: 17957.5 Da PI: 8.8046

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G297600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	115	138	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C++C+ksF+ ++ Hi + H Aqcoe1G297600.1.p 115 YGCKICSKSFRKHEGVLFHIYReH 138 67******************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE pattern	PS00028	0	117	138	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence Send to blast
MTKTLFAIAV ALALVTLAIA TTTTKASERD EPNNFTGHHF AVPTEHFSCS LDEKLPCRSK 60 NQYKLDNDTL VEHVGEARSV ELPQGKVDYA FKNNKVRCLD DYIKTVRNDA HGFTYGCKIC 120 SKSFRKHEGV LFHIYREHPD ILKNISKVGC KGNAKESIKA *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5CC63	1e-115	A0A2G5CC63_AQUCA; Uncharacterized protein
STRING	Aquca_066_00047.1	1e-116	(Aquilegia coerulea)

Link Out ? help Back to Top
Phytozome	Aqcoe1G297600.1.p