PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G317200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Dof
Protein Properties Length: 228aa    MW: 25330.1 Da    PI: 5.3543
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G317200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof106.11.8e-332682258
             zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58
                       ke  l+cp Cds+ntkfCy+nny+ sqPry+Ck+C+ryWtkGG lrnvP+Gg rr++
  Aqcoe1G317200.1.p 26 KEPLLNCPWCDSMNTKFCYFNNYNRSQPRYYCKSCKRYWTKGGNLRNVPIGGNRRNK 82
                       567789*********************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-202582IPR003851Zinc finger, Dof-type
PfamPF027016.0E-302982IPR003851Zinc finger, Dof-type
PROSITE profilePS5088426.0213084IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103268IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MGLNSKQFSN KRDDLKLKKE DQNQQKEPLL NCPWCDSMNT KFCYFNNYNR SQPRYYCKSC  60
KRYWTKGGNL RNVPIGGNRR NKPLKTINSN SSSIGFEENG LLSNGVAEKL NVLSGSLGNG  120
VSDSSPLSLP FSLPNLDFTN LTSFETTPSA ISPSSAHLDG EIQGCRGGID GSVEDPCSSS  180
TSTFVEIKPS LQLSSSNSFM DSWSWDDFNT IIFTDMNQTW EYFEGKD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CH951e-165A0A2G5CH95_AQUCA; Uncharacterized protein
STRINGAquca_054_00034.11e-166(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38000.17e-28DNA binding with one finger 4.7