PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G351500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 490aa    MW: 55227.8 Da    PI: 4.8352
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G351500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.11.2e-2161521128
                NAM   1 lppGfr...FhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeek...ew.yfFskrdkkyat...gkrknra 77 
                        lppGfr   F P+d+el+ +yLkkk++g+ l++ + ik+ d+y    P+++ +    ++++  +   +w yfF+k +kk+ +    kr  r+
  Aqcoe1G351500.1.p   6 LPPGFRfirFIPSDSELILQYLKKKINGEALPILNLIKDRDLYGNeSPSQIFQtcssCFDS--SvfdNWlYFFTKIKKKSINnpsTKRIDRI 95 
                        68898622268**********************9*********8746***96434442222..23357779999999998761114566667 PP

                NAM  78 tksgyWkatgkdkevlsk..kgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                        + +g+Wk + +  +v+++  k+ l+g +  + f      + ++++ e+ +W+mhe+++
  Aqcoe1G351500.1.p  96 VGNGTWKLQKT-YNVFDEknKSLLIGYRSAFNFVaksklETNNNEEEQHSWIMHEFTM 152
                        88*****8765.667665344455**********8777667788889*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-194163IPR003441NAC domain
PfamPF023651.4E-148151IPR003441NAC domain
PROSITE profilePS5100519.8139184IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MKPLRLPPGF RFIRFIPSDS ELILQYLKKK INGEALPILN LIKDRDLYGN ESPSQIFQTC  60
SSCFDSSVFD NWLYFFTKIK KKSINNPSTK RIDRIVGNGT WKLQKTYNVF DEKNKSLLIG  120
YRSAFNFVAK SKLETNNNEE EQHSWIMHEF TMKGSIWALC KLRKGNLLRE SKYNDDVIPS  180
IASKRKRVVL EVDDDDDDDD KKKKKRRTCY RGSSSKSNTT MCDEGLVVVQ QQPQCVIDRQ  240
QKVVVNQCVT ASISSSYPWH SESEFFQPDH QQGDACDNSF DYYRYCNPSG DDCNMASTSY  300
PLSPLTTLDD LPSFYEANSQ KPHQVCADSN LTTSSCLNEC GITSMGAPTL TGVSIPDVDN  360
FLYEDNSQQP HQVCTDNNVT PYSLSPQRTV DDLPSSYEDN SRRPDHICAD SMVTTSSCLT  420
ECGTTSTSCV SNGAPTQTLT GVAIPDMDSI LASLMDNQFA YNTVDEEKVW GPNDWKELEL  480
MLLSGIESF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184206RKRVVLEVDDDDDDDDKKKKKRR
2200206KKKKKRR
3201206KKKKRR
4202206KKKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CL170.0A0A2G5CL17_AQUCA; Uncharacterized protein
STRINGAquca_047_00092.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.37e-13NAC family protein