PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G368600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 118aa    MW: 13939.7 Da    PI: 8.47
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G368600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.00023352524
                       HHHHHHHHHHHHHHHHHHHH CS
                HLH  5 hnerErrRRdriNsafeeLr 24
                       + e+ErrRR+++N+++ +Lr
  Aqcoe1G368600.1.p 33 NLEAERRRRHKLNERLINLR 52
                       6689************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-102093IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.3122879IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-82898IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MEEFYVQNEL AEQGRRGRQG KNINDDTQFK SKNLEAERRR RHKLNERLIN LRLFTHYHFL  60
CDYKFATIID DAITYITGLQ KHVKALGDQI REMETRETEK QGSVGGRVQE EQIEKLQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010054452.12e-18PREDICTED: transcription factor DYT1
TrEMBLA0A2G5ERV77e-80A0A2G5ERV7_AQUCA; Uncharacterized protein
STRINGAquca_005_00413.11e-80(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.19e-08bHLH family protein