PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G372800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 203aa    MW: 23403.9 Da    PI: 6.5294
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G372800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.4e-062871755
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         Er+RR +  +++  Lr l+P+      + l K +    A+ YIk+Lq
  Aqcoe1G372800.1.p 28 LTERKRRLKNHEGLMALRALVPNI-----TNLKKETAIDDAITYIKELQ 71
                       57*********************6.....589999*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.75E-111483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.5982170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-92489IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-42776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.79E-43072No hitNo description
SuperFamilySSF550212.0E-6120185No hitNo description
PROSITE profilePS516719.43124200IPR002912ACT domain
Gene3DG3DSA:3.30.70.2608.6E-5125174No hitNo description
CDDcd021160.00405125166No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MDYSCCYCSE GEHKEEKKNE EFKSKNLLTE RKRRLKNHEG LMALRALVPN ITNLKKETAI  60
DDAITYIKEL QKHENALADQ LAEIEAAFEK EVKQEQRDNI THGIEKLKIK DEVKVTQINE  120
NKLWVEIICE NKPGVFTRLM ETVSDQGFEV TDMNFTTSEG STLILFGLKV TNGEMVAAKQ  180
IKLFLKKLMR GFIDREDRYQ GK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12934ERKRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5ERR01e-136A0A2G5ERR0_AQUCA; Uncharacterized protein
STRINGAquca_005_00379.11e-137(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.11e-32bHLH family protein