PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G373200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 247aa    MW: 28382.4 Da    PI: 9.7632
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G373200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.92.7e-2591491128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk......kvkaeek.....ew.yfFskrdkkyat..gkrknra 77 
                        lp+G++F+P+d++l+ +yL+kk++g+ l++ +vi++ d+y    P ++ +      +     +     +w yfF+k +kk ++  +kr  r+
  Aqcoe1G373200.1.p   9 LPRGVQFNPSDSDLIPYYLQKKINGEALPTLNVIQDRDLYGKeTPCQIFQscssssS-----NssgfdNWlYFFTKIKKKFNNasDKRIDRI 95 
                        799************************************97637****643443321.....123445888999999988775337799999 PP

                NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                        + +g W++ g+++   ++k+ ++g ++ L f    + ++ + +  +W+mhey++
  Aqcoe1G373200.1.p  96 VGNGKWNNLGTNRVYNNNKSIVIGYRTLLNFIvksHTNEDEQQLHSWIMHEYTM 149
                        9**********99999989999**********7654566677789*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-236167IPR003441NAC domain
PROSITE profilePS5100527.4649169IPR003441NAC domain
PfamPF023652.8E-1510148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MMTPLLLPLP RGVQFNPSDS DLIPYYLQKK INGEALPTLN VIQDRDLYGK ETPCQIFQSC  60
SSSSSNSSGF DNWLYFFTKI KKKFNNASDK RIDRIVGNGK WNNLGTNRVY NNNKSIVIGY  120
RTLLNFIVKS HTNEDEQQLH SWIMHEYTMK GNDALDKDSI WAVCKLRKGR LLKDSHHNPP  180
RSLKRKRVVA VAAEDSEFYV SEKKRTCYEG SSSAFKNSYD EGLVVQQQCV ICCAQRKLMH  240
QYPRLK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5ERN76e-68A0A2G5ERN7_AQUCA; Uncharacterized protein
STRINGAquca_005_00374.11e-68(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.18e-15NAC-domain protein 101