PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G373300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 414aa    MW: 47288 Da    PI: 7.1636
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G373300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.12.1e-20541971128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..............kvka..eekew.yfFskrdkkyatgk.. 72 
                        lppGfrF P+d++l+ +yLkkk++g+ l++ + ik+ ++y    P+++ +              +  +  +++ w y F+k +kk +t +  
  Aqcoe1G373300.1.p  54 LPPGFRFTPSDSDLL-YYLKKKINGEALPILNLIKDRNLYGNeTPSQIFQtcsssttssnssatA--SddNHHYWlYLFTKIKKKFNTTDck 142
                        79*************.**************9********98736***964578888887776422..2224447789999998888764422 PP

                NAM  73 rknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                           r++ +g+Wk + k  +++++  k+ l+g +++L f  ++++     +W+mhey+l
  Aqcoe1G373300.1.p 143 MIDRIVGNGTWKISRK-YKIHDEnnKSLLIGYRTVLNFIVKNEK--LPHSWIMHEYTL 197
                        668999******8877.667776334555**********43333..5789******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-2043217IPR003441NAC domain
PROSITE profilePS5100522.65754217IPR003441NAC domain
PfamPF023651.9E-1455197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MRRQYGNKFF MLERMWNHID IMCIKWSTNT NTNKGFCLIS ITMNTNKMMK PFRLPPGFRF  60
TPSDSDLLYY LKKKINGEAL PILNLIKDRN LYGNETPSQI FQTCSSSTTS SNSSATASDD  120
NHHYWLYLFT KIKKKFNTTD CKMIDRIVGN GTWKISRKYK IHDENNKSLL IGYRTVLNFI  180
VKNEKLPHSW IMHEYTLKGN SALDKDSIWA VCKLRKRKLL KDSDDNPPRR SLKRVRPVAE  240
DDECYVPEKK HTSCYSGSSS AFKNTYDEGL VVQVQQQCVI DDQENLDDWL CIPTEDESET  300
LSISSSYPLN SENGDYFQSQ PQSDQQQHTS ANNFEEYWFC NPSGDDCNAA SASYPLSPLM  360
TLDDLPSFYE YNSQQPHQVG ADSNATITSC WNQCRITSTA SNGASTPTGV LIS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213218LRKRKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5ERP71e-110A0A2G5ERP7_AQUCA; Uncharacterized protein
STRINGAquca_005_00384.11e-111(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.16e-12NAC domain containing protein 76