PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G373400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 567aa    MW: 63815.9 Da    PI: 6.1417
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G373400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.18e-2461491128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeek...ew.yfFskrdkkyat...gkrknratks 80 
                        lppGfrF P+d+el+ +yLkkk++g+ l++ + ik+ d+y    P+++ +    ++++  +   +w yfF+k +kk+ +    kr  r++ +
  Aqcoe1G373400.1.p   6 LPPGFRFIPSDSELILQYLKKKINGEALPILNLIKDRDLYGNeSPSQIFQtcssCFDS--SvfdNWlYFFTKIKKKSINnpsTKRIDRIAGN 95 
                        79****************************9*********8746***96434442222..2335777999999999876111456666788* PP

                NAM  81 gyWkatgkdkevlsk..kgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                        g+Wk +  + +v+++  k+ l+g +  + f      + ++++ e+ +W+mhe+++
  Aqcoe1G373400.1.p  96 GTWKLQK-TYDVFDEknKSLLIGYRSAFNFVaksklETNNNEEEQHSWIMHEFTM 149
                        ****875.5777776344455**********8777667788889*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-214160IPR003441NAC domain
PROSITE profilePS5100524.1526182IPR003441NAC domain
PfamPF023651.9E-167148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MKPLRLPPGF RFIPSDSELI LQYLKKKING EALPILNLIK DRDLYGNESP SQIFQTCSSC  60
FDSSVFDNWL YFFTKIKKKS INNPSTKRID RIAGNGTWKL QKTYDVFDEK NKSLLIGYRS  120
AFNFVAKSKL ETNNNEEEQH SWIMHEFTMK GSIWALCKLR KGNLLRESKY NDDVIPSTAL  180
KRKRVVLEVD DDDDDDKKKK RRTCCRGSSS KSNTTMCDDD KTKKKRRTCY RGSSSKSNTT  240
MCDEGLVVVQ QQPQCVIDQQ QKVVVNQCVT ASISSSYPWH SESEFFQPDH QQGDACDNSF  300
DYYRYCNPSG DDCNMASTSY PLSPLTTLHD LPSFYEANSQ QPHQVCADIN LTTSSCLNEC  360
GITSMGAPTL TGVSIPDVDN FLYEDNSQQP HQVCTDNNVT SYSLSPQRTV DDLPSSYEDN  420
SRRPDHICAD SMVTTTSCLT ECGTTSTSCV SNGAPTQTLT GVPIPDMDSI LASLMDNQFA  480
YNTVDEEKAG KLHRGIPLWN GITSIGAPTL KAVSIPDVDY SLYKDNSQQP HQIHTNLTWF  540
LQLLGRVIWF LLLLVIVLIL LFCFTL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181201RKRVVLEVDDDDDDDKKKKRR
2196201KKKKRR
3222226KKKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5ERN70.0A0A2G5ERN7_AQUCA; Uncharacterized protein
STRINGAquca_005_00374.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.37e-15NAC family protein