PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G374900.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 258aa MW: 28020.3 Da PI: 5.6632

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G374900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	33.4	1e-10	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 +++m+vkgLtl h+kSHLQkYRl Aqcoe1G374900.1.p 1 MQIMSVKGLTLFHLKSHLQKYRL 23 79********************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-9	1	24	IPR009057	Homeodomain-like
Pfam	PF14379	6.5E-8	62	107	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence Send to blast
MQIMSVKGLT LFHLKSHLQK YRLSKHSGTT KTAPSALYGM DSTGTDGSFE SFSSSELNEG 60 FDVSQALRKE IEGQRKIELQ LEVEKSIKDR VSSEKRYLDY MLERASQRHY QTLRVANCVT 120 NIPKQPEIPS TEMSSTIETW NPLGFYSFSP QIGAAEAVRP QVPASEEFPT LYTNTVNYSP 180 NSYLTATPVI LPSESTSAGG MSTDFDPRIA KGGMNMAADD SSLWGVAANG IPEFGAHIMN 240 QSGGGGGFNG YSGCPPY*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5CNB3	1e-109	A0A2G5CNB3_AQUCA; Uncharacterized protein
STRING	Aquca_044_00135.1	1e-110	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	3e-20	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe1G374900.1.p