PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G376300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 399aa    MW: 44402.5 Da    PI: 9.0821
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G376300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.9e-05162184223
                        EETTTTEEESSHHHHHHHHHH.T CS
            zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                        +C+ Cg++F+  ++L+ H+ + H
  Aqcoe1G376300.1.p 162 RCSECGEVFPKIESLELHQAVrH 184
                        8******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280161184IPR007087Zinc finger, C2H2
PROSITE profilePS501579.141161189IPR007087Zinc finger, C2H2
SuperFamilySSF563994.99E-23186395No hitNo description
Gene3DG3DSA:3.90.228.105.7E-13186394IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MNPKRKKKHE KQPSSWEQIK NLLSFKHKHH MEVGRQSSQV HDPSKKKNNN GTVRYLKIGS  60
SCNSICSFSD VVHGNTKVVH RADNSPHSYN SSISQNTSLL SRKPQPVIGS SMRSNGVCRG  120
TGYTSSASSS RGLQFRKLSG CYECHMIVDP IRYQSPRTTI CRCSECGEVF PKIESLELHQ  180
AVRHAVSELD HSDSSRNIVE IIFKSSWLRK DNPICKIEWI LKVHNTQRTI QRFEDCRDAV  240
KLHATTNTKK NPRCVADGNE LLRFYCTTIS CRLGASSSST LCDSIPGCGV CTIIRHGFPR  300
KAYNYKGVLT AASSGNAHDD LSCMDARRAM LVCRVIAGRV RHIFDDQTLA TDDGISTVGT  360
YDSVAGCLGI YSDLEELVVF NPRAILPCFV VIYNSSDH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002276294.10.0PREDICTED: uncharacterized protein LOC100250572
RefseqXP_018818786.10.0PREDICTED: uncharacterized protein LOC108989587
RefseqXP_018833374.10.0PREDICTED: uncharacterized protein LOC109000816
TrEMBLA0A2G5ERK30.0A0A2G5ERK3_AQUCA; Uncharacterized protein
STRINGAquca_005_00353.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-148C2H2-like zinc finger protein