PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G376300.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

C2H2

Protein Properties

Length: 266aa MW: 30378.5 Da PI: 10.3671

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G376300.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.9e-05	162	184	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg++F+ ++L+ H+ + H Aqcoe1G376300.2.p 162 RCSECGEVFPKIESLELHQAVrH 184 8******************9888 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE pattern	PS00028	0	161	184	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	9.141	161	189	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003950	Molecular Function	NAD+ ADP-ribosyltransferase activity
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence Send to blast
MNPKRKKKHE KQPSSWEQIK NLLSFKHKHH MEVGRQSSQV HDPSKKKNNN GTVRYLKIGS 60 SCNSICSFSD VVHGNTKVVH RADNSPHSYN SSISQNTSLL SRKPQPVIGS SMRSNGVCRG 120 TGYTSSASSS RGLQFRKLSG CYECHMIVDP IRYQSPRTTI CRCSECGEVF PKIESLELHQ 180 AVRHAVSELD HSDSSRNIVE IIFKSSWLRK DNPICKIEWI LKVHNTQRTI QRFEDCRDAV 240 KLHATTNTKK NPRLWSMHYY KAWVS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002510523.1	1e-110	uncharacterized protein LOC8274650
TrEMBL	A0A2G5ERK3	0.0	A0A2G5ERK3_AQUCA; Uncharacterized protein
STRING	Aquca_005_00353.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	5e-92	C2H2-like zinc finger protein

Link Out ? help Back to Top
Phytozome	Aqcoe1G376300.2.p