PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G390500.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 798aa    MW: 87973.2 Da    PI: 6.119
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G390500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.52.1e-31200256360
                        -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        DgynWrKYGqK++kgsefprsYYrCt+++C+vkk++e+s+ d++v++i+Y+geHnh+k
  Aqcoe1G390500.3.p 200 DGYNWRKYGQKHIKGSEFPRSYYRCTHPNCQVKKQLECSQ-DGQVTDIVYKGEHNHPK 256
                        9**************************************9.***************85 PP
2WRKY941.1e-29447504260
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        +  y+WrKYGqK++kgsefprsYYrCt+++C+vk ++ers+ d++++ei+Y+g+H+h+k
  Aqcoe1G390500.3.p 447 ENAYHWRKYGQKNIKGSEFPRSYYRCTHPNCQVKMQLERSH-DGRIIEIIYKGKHDHPK 504
                        568**************************************.***************85 PP
3WRKY932.2e-29620678159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        +dDgy+W+KYG+K vkg+ +pr+YYrC+  gC+vkk+ver+a++pk+v++tYeg+Hnh+
  Aqcoe1G390500.3.p 620 VDDGYRWQKYGRKIVKGNSNPRNYYRCSNGGCQVKKHVERAANNPKAVITTYEGKHNHD 678
                        59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-26185257IPR003657WRKY domain
PROSITE profilePS5081123.066193257IPR003657WRKY domain
SuperFamilySSF1182901.44E-24196257IPR003657WRKY domain
SMARTSM007742.7E-34198256IPR003657WRKY domain
PfamPF031064.4E-25200255IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.1E-26441505IPR003657WRKY domain
PROSITE profilePS5081123.709441505IPR003657WRKY domain
SuperFamilySSF1182903.01E-23442505IPR003657WRKY domain
SMARTSM007744.4E-31446504IPR003657WRKY domain
PfamPF031063.9E-22449503IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-32605680IPR003657WRKY domain
SuperFamilySSF1182902.09E-26613680IPR003657WRKY domain
PROSITE profilePS5081133.373615680IPR003657WRKY domain
SMARTSM007742.7E-32620679IPR003657WRKY domain
PfamPF031069.8E-23621678IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 798 aa     Download sequence    Send to blast
MAMGGILSVQ GERLSGSSFK STEDKSPRAS SLTSHHANPN GVAELSKPDE SPQLSVAVTS  60
DNNVGDGTQL RRNRDEIQDD NDPESKRRCL NFSTEIASDS AANDRQHMES FQAHQIQSQT  120
FASTSSDDNV TAAEMSHVMA PCTTVFKPPI DMATSKALVP VGGDLSASQQ RHGADVGMQV  180
IQTDHKVTCH SGTADRFWGD GYNWRKYGQK HIKGSEFPRS YYRCTHPNCQ VKKQLECSQD  240
GQVTDIVYKG EHNHPKPQAS SHIAVGRILS IQEEGFEQVS SLHQAYDKSS ACQTTDHTDH  300
PVQTCETAVQ GEPAKSNRTG ENADNSAEVD SKCGRLEVTK ETSKDAVTAM NHQKYKPSVE  360
VQGHFQAETP LSSPSIKIKE AAGSPHEYTP TLTVSNSPVY MVTSKGIVPV EVDTDDKRQR  420
QNSVNELAVE EPNHNGLSLS MTEKLLENAY HWRKYGQKNI KGSEFPRSYY RCTHPNCQVK  480
MQLERSHDGR IIEIIYKGKH DHPKPQPITR MAIGAILSLE EDRPDRISDG SGGNPSNGPV  540
QTCACTNPSR IPKLTPVTRS VENFDTTAEK LKRGNEVEDD IDMESKRRKK DVGDVDLTPV  600
IRTPREPRVV VETLSEVDVV DDGYRWQKYG RKIVKGNSNP RNYYRCSNGG CQVKKHVERA  660
ANNPKAVITT YEGKHNHDLP LARITTHDTT GLVSSADGLN DTLKTRSGEL IANGIDAGVV  720
NGLSLENRIC EREEIIDVEP IESQSTITDL DRNKMIEPAP ALAHNDELDL DADQGLSFDT  780
PSSTQLVYPN NTENLES*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-31200680677Probable WRKY transcription factor 4
2lex_A1e-31200680677Probable WRKY transcription factor 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EQY80.0A0A2G5EQY8_AQUCA; Uncharacterized protein
STRINGAquca_005_00232.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.12e-70WRKY family protein