PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G390700.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 657aa    MW: 71908.8 Da    PI: 5.5183
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G390700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.93.1e-31274331260
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        +DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk++ers+ d++++ei+Y+g+H+h+k
  Aqcoe1G390700.2.p 274 EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCQVKKQLERSH-DGQITEIIYKGKHDHPK 331
                        7****************************************.***************85 PP
2WRKY107.18.9e-34452510159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        ldDgy+WrKYGqK+vkg+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  Aqcoe1G390700.2.p 452 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 510
                        59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.0E-27267332IPR003657WRKY domain
PROSITE profilePS5081123.502268332IPR003657WRKY domain
SuperFamilySSF1182902.09E-24272332IPR003657WRKY domain
SMARTSM007742.0E-34273331IPR003657WRKY domain
PfamPF031069.1E-24274330IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.9E-38437512IPR003657WRKY domain
SuperFamilySSF1182909.29E-30444512IPR003657WRKY domain
PROSITE profilePS5081139.054447512IPR003657WRKY domain
SMARTSM007744.1E-40452511IPR003657WRKY domain
PfamPF031061.4E-26453510IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    Send to blast
MEENVDSELR DHYRRAEEAE NRSYELQFDS CNGENSDDPE RNDFSMKLSD SRVFSTIGSN  60
NAARYKLMSP ARLPITRSPC LTIPPGLSPT TLLDSPVLLS NMKAEPSPTT GTFNKPQIMY  120
DSVVSDGFSS PRDSCNSNAY DGISSGTFEF KPHVRSSLGS GLSSMGSMAC GGSGNQQDEP  180
FGQAQGLFQT TNFSSALSVH NESMPASSHE LTLSVATPNP LNPSGYMVAS RAIVPAEVSS  240
EEMMRKQILD SGAQETQSDH KETSPSIAAD RSSEDGYNWR KYGQKHVKGC EFPRSYYKCT  300
HPNCQVKKQL ERSHDGQITE IIYKGKHDHP KPQPSRRMAA GTIVSAQEEG SDRFSSLNNA  360
EDKLSSAYAN RQIQPNGSPE FSPVTTIDDN VDGIGAPPNG IINEVEEDDE DDPESKRRKK  420
ESGGSGIDVT LMGKATREPR VVVQTLSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTN  480
AGCPVRKHVE RASHDPKAVI TTYEGKHNHD VPAARTSAHD TAGPTLYHTA PNSMLSTRSE  540
EIDTISLDLG VGISSSPENR SNEMQQAVDV EPLRSYSYIT DPGSSRMIQA YSSSGTDQYG  600
SRQGNGTDQY GSRQGNGTDQ YGSRQVVGES FSFETRPLNH SSNPYQQNMG RLMMGP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-37274513878Probable WRKY transcription factor 4
2lex_A1e-37274513878Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010270167.10.0PREDICTED: probable WRKY transcription factor 20
TrEMBLA0A2G5EQX80.0A0A2G5EQX8_AQUCA; Uncharacterized protein
STRINGAquca_005_00231.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-145WRKY family protein