PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G390700.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 501aa    MW: 55143.9 Da    PI: 5.089
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G390700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31274331260
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        +DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk++ers+ d++++ei+Y+g+H+h+k
  Aqcoe1G390700.3.p 274 EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCQVKKQLERSH-DGQITEIIYKGKHDHPK 331
                        7****************************************.***************85 PP
2WRKY36.69e-12452474123
                        ---SS-EEEEEEE--TT-SS-EE CS
               WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                        ldDgy+WrKYGqK+vkg+++pr 
  Aqcoe1G390700.3.p 452 LDDGYRWRKYGQKVVKGNPNPRV 474
                        59*******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-27267332IPR003657WRKY domain
PROSITE profilePS5081123.502268332IPR003657WRKY domain
SuperFamilySSF1182901.44E-24272332IPR003657WRKY domain
SMARTSM007742.0E-34273331IPR003657WRKY domain
PfamPF031066.3E-24274330IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.4E-14437475IPR003657WRKY domain
SuperFamilySSF1182907.45E-10444475IPR003657WRKY domain
PROSITE profilePS5081115.824447475IPR003657WRKY domain
SMARTSM007744.2E-5452489IPR003657WRKY domain
PfamPF031062.7E-7453474IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MEENVDSELR DHYRRAEEAE NRSYELQFDS CNGENSDDPE RNDFSMKLSD SRVFSTIGSN  60
NAARYKLMSP ARLPITRSPC LTIPPGLSPT TLLDSPVLLS NMKAEPSPTT GTFNKPQIMY  120
DSVVSDGFSS PRDSCNSNAY DGISSGTFEF KPHVRSSLGS GLSSMGSMAC GGSGNQQDEP  180
FGQAQGLFQT TNFSSALSVH NESMPASSHE LTLSVATPNP LNPSGYMVAS RAIVPAEVSS  240
EEMMRKQILD SGAQETQSDH KETSPSIAAD RSSEDGYNWR KYGQKHVKGC EFPRSYYKCT  300
HPNCQVKKQL ERSHDGQITE IIYKGKHDHP KPQPSRRMAA GTIVSAQEEG SDRFSSLNNA  360
EDKLSSAYAN RQIQPNGSPE FSPVTTIDDN VDGIGAPPNG IINEVEEDDE DDPESKRRKK  420
ESGGSGIDVT LMGKATREPR VVVQTLSEVD ILDDGYRWRK YGQKVVKGNP NPRVFDHDFS  480
DYLKVFCILL IATKASFYFF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-172753321674WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in starch synthesis (PubMed:12953112). Acts as a transcriptional activator in sugar signaling (PubMed:16167901). Interacts specifically with the SURE and W-box elements, but not with the SP8a element (PubMed:12953112). {ECO:0000269|PubMed:12953112, ECO:0000269|PubMed:16167901}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by sugar. {ECO:0000269|PubMed:12953112}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010270167.10.0PREDICTED: probable WRKY transcription factor 20
SwissprotQ6VWJ61e-115WRK46_HORVU; WRKY transcription factor SUSIBA2
TrEMBLA0A2G5EQX80.0A0A2G5EQX8_AQUCA; Uncharacterized protein
STRINGAquca_005_00231.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-100WRKY family protein