PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G408600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 311aa    MW: 34592.5 Da    PI: 9.6969
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G408600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.82.5e-1234118186
           trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        +W++  + +Li+a  ++  +l+rg+l++++W+ev++++     + ++ +++ +qCk++++ ++k+yk ++           s++p++++l+
  Aqcoe1G408600.1.p  34 CWSEGATATLIDAWGDRYLQLSRGNLRQKDWKEVADAVnsrqdSIKKPRKTDVQCKNRIDTIKKKYKLERSKPLP------SKWPFYSHLD 118
                        7*************************************88665445557799***************88765553......5899999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.3E-2532120No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MENISAHNTP TSNRSHHPYN GNHSVSGGGG REDCWSEGAT ATLIDAWGDR YLQLSRGNLR  60
QKDWKEVADA VNSRQDSIKK PRKTDVQCKN RIDTIKKKYK LERSKPLPSK WPFYSHLDQL  120
IGTPNVITPK LKPPPPPLPQ HPSSSSPVNF SVRKLNPNPN PNPNHYNSSA VIYSGGSSSK  180
SRLNSSPFGS TGSSHDGDDD EDEEDLMVDI GVGGGGSRSR SRKSNGVIGN SVPNDDGEAF  240
REIAKAIVKF GEVYERIESS KQQQIMELER QRMEFTKDLE FQRMQMFMEA QLELEKTKRP  300
KYAPGAGKKQ *
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010257090.11e-105PREDICTED: trihelix transcription factor ASIL1 isoform X3
SwissprotQ9LJG87e-38ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2G5CMF10.0A0A2G5CMF1_AQUCA; Uncharacterized protein
STRINGAquca_045_00192.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.13e-39sequence-specific DNA binding transcription factors