PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G411400.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 250aa MW: 27851.9 Da PI: 8.5902

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G411400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	63	109	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRR+riN +++Lr+llP a K++Ka+ L +v+ +k+L Aqcoe1G411400.1.p 63 VSHSQAEKRRRERINGHLSTLRRLLPRA-----DKMDKAALLGSVVNQVKEL 109 68***********************9.....8******9999988887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.06E-12	57	112	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.716	60	109	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.7E-9	63	109	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.01E-9	63	112	No hit	No description
Gene3D	G3DSA:4.10.280.10	9.6E-12	64	112	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.0E-9	66	115	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF55021	7.44E-7	153	214	No hit	No description
Gene3D	G3DSA:3.30.70.260	5.9E-7	153	200	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence Send to blast
MEECSRLGWP EEANLFQYHE YNNVPFILPW PPQTSMSSIF PAAHGGYLSS SASVNDRTAA 60 SSVSHSQAEK RRRERINGHL STLRRLLPRA DKMDKAALLG SVVNQVKELK RKAIEVGKLY 120 TIPSDVDEVF VDRDNNEDHS NIDNKDCIVF KASVCCEDRP ELLTDLNQAL NGLKLRIVKA 180 DMATLGGRVT NVMILCTNES EDKVCLSSLK QSIKVVLSRV ASMSMPSVRA FSSKRQRMLL 240 PSNYSHLSL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010253805.1	3e-87	PREDICTED: transcription factor bHLH51-like
TrEMBL	A0A2G5CM46	0.0	A0A2G5CM46_AQUCA; Uncharacterized protein
STRING	Aquca_045_00168.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	5e-45	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe1G411400.1.p