PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G436300.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 159aa MW: 17438.4 Da PI: 4.4743

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G436300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.9	0.00042	1	18	38	55
STCHHHHHHHHHHHHHHH CS HLH 38 lsKaeiLekAveYIksLq 55 ++Ka+iL A+e++k+Lq Aqcoe1G436300.1.p 1 MNKASILSDAIEFVKELQ 18 59***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	3.6E-6	1	30	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence Send to blast
MNKASILSDA IEFVKELQTG VKDLQDELEA PSDENGDKNR RDNGDKNGIS PGAKSEQDES 60 LEGIKLGITD QGNRCSSNGK ITSCIKQTED FMTAGETTNG EVTQIDGKKF YLKVFCEHRP 120 GGFVRLMEAM SSLGLEVTNV NVNMRNLDLT PKYYTCFD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	42	DKNRRDN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018841495.1	3e-31	PREDICTED: transcription factor ABORTED MICROSPORES-like isoform X2
TrEMBL	A0A2G5CA46	5e-77	A0A2G5CA46_AQUCA; Uncharacterized protein
TrEMBL	A0A2G5CB98	1e-76	A0A2G5CB98_AQUCA; Uncharacterized protein
STRING	Aquca_072_00056.1	2e-77	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	3e-25	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe1G436300.1.p