PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G439000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 276aa    MW: 31206.6 Da    PI: 6.5075
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G439000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.35.5e-4451362127
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                        ppGfrF Pt+eel+++yL+kk+eg++  el++  ++ +d+y+++Pw+Lp+     ++++ ++w+fF++r++++a+g r+nr+t+sgyWkatg
  Aqcoe1G439000.1.p   5 PPGFRFYPTEEELISFYLRKKLEGDReAELFHRlVPVIDLYQFDPWHLPQisgeLCHGDPEQWFFFCPRQEREARGGRPNRITSSGYWKATG 96 
                        8***********************99655555548999***********655653444677******************************* PP

                NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                        +   v+sk+++++g+kkt+vf++grap+g+kt+W m ey+
  Aqcoe1G439000.1.p  97 SPGLVYSKDDRAIGVKKTMVFHQGRAPTGRKTKWKMMEYK 136
                        ***************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-483164IPR003441NAC domain
PROSITE profilePS5100548.714164IPR003441NAC domain
PfamPF023654.1E-245136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MDEHPPGFRF YPTEEELISF YLRKKLEGDR EAELFHRLVP VIDLYQFDPW HLPQISGELC  60
HGDPEQWFFF CPRQEREARG GRPNRITSSG YWKATGSPGL VYSKDDRAIG VKKTMVFHQG  120
RAPTGRKTKW KMMEYKAIEG EATCSNNPSI STRNEFSVCR VYITSGCLRA FDRRPAGPTT  180
TDVSMDQAQT NVASTSHQQR SFEITQTLIN NQAQGNVASS SHQGSPNTSD NSRSPDSASL  240
GTEVHLSQTP YHADDSHMAD PLWQWDELWE CNGLK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-37516218163NO APICAL MERISTEM PROTEIN
1ut4_B3e-37516218163NO APICAL MERISTEM PROTEIN
1ut7_A3e-37516218163NO APICAL MERISTEM PROTEIN
1ut7_B3e-37516218163NO APICAL MERISTEM PROTEIN
4dul_A3e-37516218163NAC domain-containing protein 19
4dul_B3e-37516218163NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010271606.11e-100PREDICTED: NAC domain-containing protein 90-like isoform X1
TrEMBLA0A2G5CA770.0A0A2G5CA77_AQUCA; Uncharacterized protein
STRINGAquca_072_00079.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.13e-84NAC domain containing protein 90