PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G455500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 220aa    MW: 23925.8 Da    PI: 6.0243
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G455500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-1752102256
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                         y+GVr + k grWv+e+r+p++   + r++lg+f ++e+Aa+a++ a+++l+g+
  Aqcoe1G455500.1.p  52 IYRGVRER-KGGRWVCEVREPYK---KSRIWLGTFPSPEMAARAYDVAALALRGN 102
                        69***955.59*********765...6*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-1251101IPR001471AP2/ERF domain
CDDcd000185.50E-3051111No hitNo description
PROSITE profilePS5103222.58952109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-2952111IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2152111IPR016177DNA-binding domain
SMARTSM003801.6E-2952115IPR001471AP2/ERF domain
PRINTSPR003678.5E-85364IPR001471AP2/ERF domain
PRINTSPR003678.5E-87591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MNIDGESSSS SSTSDHQCPS NVQTVHIESS SAAGSHKRKT GRKKFQETRH PIYRGVRERK  60
GGRWVCEVRE PYKKSRIWLG TFPSPEMAAR AYDVAALALR GNAAALNFAD SAYTLQQAKS  120
SSATDIQSAA LAAAEAYKPL PSSDDVALPF VQNQAIHCVE SLEKQPEIST PFLDEEAMFN  180
MPGLLSSMAE GMLITPPALA KGFNWDEKDC NIDLSLWSD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-13501081271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243826.13e-86PREDICTED: dehydration-responsive element-binding protein 1B-like
TrEMBLA0A2G5D6P61e-163A0A2G5D6P6_AQUCA; Uncharacterized protein
STRINGAquca_027_00400.11e-163(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.14e-39C-repeat/DRE binding factor 1