PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G456300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 187aa    MW: 20074.3 Da    PI: 4.9192
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G456300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.8e-182879156
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                       + y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g+
  Aqcoe1G456300.1.p 28 PSYRGVRRRS-NGKWVSEIREPK----KpNRIWLGSFPTPEMAAVAYDVAALALKGH 79
                       57*****888.8*********94....468************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-102879IPR001471AP2/ERF domain
CDDcd000185.95E-312888No hitNo description
SuperFamilySSF541711.77E-202988IPR016177DNA-binding domain
PROSITE profilePS5103222.6422986IPR001471AP2/ERF domain
SMARTSM003804.7E-342992IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-292988IPR001471AP2/ERF domain
PRINTSPR003671.4E-103041IPR001471AP2/ERF domain
PRINTSPR003671.4E-106888IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MYYSQFTQKD DSSSGSGSRN ATSPGHHPSY RGVRRRSNGK WVSEIREPKK PNRIWLGSFP  60
TPEMAAVAYD VAALALKGHD AELNFPNSAA SLPVPASTSP RDIQVAAASA AAAAGAAADS  120
LALNSRNNLP QNPPVPSNEF MDEDLIFDMP NILVNMAEGM LISPPLFHVT DDDAYSTVDQ  180
NLWNYP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1527881274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621703.17e-72ethylene-responsive transcription factor ERF024
SwissprotQ9SJR06e-54ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2G5D6P01e-133A0A2G5D6P0_AQUCA; Uncharacterized protein
STRINGAquca_027_00393.11e-134(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-44ERF family protein