PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G464100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 341aa MW: 36537.5 Da PI: 9.2015

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G464100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.9e-39	73	133	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ Aqcoe1G464100.1.p 73 PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 133 67899*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-34	57	126	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.5E-33	76	131	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.609	77	131	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	79	115	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence Send to blast
MVFPPVPVYL DPPNWQQQTN YQQGSTSDNP QHHHQQQLPP QQLLPPAGGS GTTGSIRPGS 60 MADRARMAKV PQPEAALKCP RCESTNTKFC YFNNYSLSQP RHFCKTCRRY WTRGGALRNV 120 PVGGGCRRNK RSKSSSSKSP SIGDRQSGPG STSSVPSNSS NSDILGHMQH QQPQQFPFMP 180 SLHHLSDYGA ADMGLNFGGI QSQMVAQTGG GSRSDMDFQV GGNSVGGNNI LSSGGPEQWR 240 LQQFPFLAGL EQQSSGLYPF EGDSAQHAPY GGAAGQLRAR APSSMAMQGQ FTPVKMEDSN 300 QGLNLSRQFL GIPGNDQYLG GGNAWTDLSG FTSSSAGHML *

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010253200.1	1e-136	PREDICTED: dof zinc finger protein DOF3.6
TrEMBL	A0A2G5D6E2	0.0	A0A2G5D6E2_AQUCA; Uncharacterized protein
STRING	Aquca_027_00331.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	1e-51	OBF-binding protein 3

Link Out ? help Back to Top
Phytozome	Aqcoe1G464100.1.p