PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G471100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 200aa    MW: 22485.9 Da    PI: 9.3461
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G471100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.00186486123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       ++C+ C++ F++   L  H  +H
  Aqcoe1G471100.1.p 64 FECKTCNRQFPSFQALGGHRASH 86
                       89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.05E-862136No hitNo description
PfamPF139123.4E-136388IPR007087Zinc finger, C2H2
PROSITE profilePS501579.8276491IPR007087Zinc finger, C2H2
SMARTSM003550.166486IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002806686IPR007087Zinc finger, C2H2
PfamPF139121.8E-10113138IPR007087Zinc finger, C2H2
PROSITE profilePS501579.432114141IPR007087Zinc finger, C2H2
SMARTSM003550.27114136IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280116136IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MSCVYSGVYM NMMNMKRKRE EADDEEMMVK NNKKDAAAMD KCLMLLPRGD HQEKENDPPT  60
SRVFECKTCN RQFPSFQALG GHRASHKKPR LIALGDDLYH DSKNQSLQLK PKAHECSICG  120
LEFPIGQALG GHMRRHRGMA NDAPSKFASM QLPTVKKANG RRVLCLDLNL APSENDLNLS  180
IRTRLASETS NPPILKHFF*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010260064.13e-55PREDICTED: zinc finger protein ZAT12
SwissprotQ9SLD44e-36ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2G5D6351e-125A0A2G5D635_AQUCA; Uncharacterized protein
STRINGAquca_027_00274.11e-125(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.19e-38C2H2 family protein