PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G497500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NF-YC
Protein Properties Length: 187aa    MW: 21342.6 Da    PI: 4.4223
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G497500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC33.96.6e-11911721899
              NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                           +P  ri++i++++    +i+ ea  l+ ka e f   +    + +  + +r++++   i++av++ + +dfl d vp++
  Aqcoe1G497500.1.p  91 SCVFPTNRINRIIRSEGTDFRITQEAIFLVNKATEQFFDLFCEDVYANVAQEHRKAVEYKHISSAVSKGKRYDFLSDFVPEK 172
                        5679*************999*****************866677789999999***************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471135.59E-1566165IPR009072Histone-fold
Gene3DG3DSA:1.10.20.101.9E-1894171IPR009072Histone-fold
PfamPF008081.4E-1294156IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MVMKKKNTNT TEDVLVISSS SSSASEEEEE EVEEESEEEE EEVKSSNNSN QQDIEEIMEI  60
DEDNSMKNKN KMKMKQKNKA VHVTTDNVTG SCVFPTNRIN RIIRSEGTDF RITQEAIFLV  120
NKATEQFFDL FCEDVYANVA QEHRKAVEYK HISSAVSKGK RYDFLSDFVP EKIRVEDALS  180
ERLPGI*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010264713.12e-40PREDICTED: uncharacterized protein LOC104602644
TrEMBLA0A2G5D4X21e-131A0A2G5D4X2_AQUCA; Uncharacterized protein
STRINGAquca_027_00046.11e-132(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.19e-28nuclear factor Y, subunit C10