PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G043600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 463aa    MW: 51123 Da    PI: 6.2041
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G043600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10177217545
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                        k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Aqcoe2G043600.1.p 177 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 217
                        788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.0E-8167220No hitNo description
SMARTSM003382.2E-8173236IPR004827Basic-leucine zipper domain
PfamPF077166.2E-7175219IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415175219IPR004827Basic-leucine zipper domain
CDDcd147086.69E-22177229No hitNo description
SuperFamilySSF579596.88E-7177220No hitNo description
PROSITE patternPS000360180195IPR004827Basic-leucine zipper domain
PfamPF141447.8E-33259334IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MGSKAERRID TEDDKDAVGG MPSFVSPLSV STQFGTEENH FHSSQVSDFE ALEQSIGFGI  60
EDSIDHSTNT VITSNKSVDQ AFNKSLDSSN ITPTSPTLVR PQKLPTERGQ RQNLVSLSSG  120
QFENWGESKM ADASPMTDTS TDVDTDDKNQ RFDVVPSAGM AASDSSDRSK DKTGDQKTLR  180
RLAQNREAAR KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISSS GDQAHSMSGN  240
GALAFDIEYA RWLEEHNRQI NELRAAVNSH ASDNELRGIV DGVISHYEEI FRLKGIAAKA  300
DVFHMLSGMW KTPAERCFMW LGGFRSSELL KLLVNQLEPL TEQQLVGICN LQQSSQQAED  360
ALSQGMEALQ QSLAETLASG SLGPSGSSGN VANYMGQMAM AMGKLGTLEG FLRQADNLRQ  420
QTLQQMHRIL TTRQSARALL AIHDYFSRLR ALSSLWLARP KE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010245498.10.0PREDICTED: transcription factor TGA2.2-like isoform X2
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A2G5EWP00.0A0A2G5EWP0_AQUCA; Uncharacterized protein
STRINGAquca_004_00791.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-148bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]