PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G051500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 1321aa    MW: 147925 Da    PI: 5.8804
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G051500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY665.8e-21636692259
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        +D ynWrKYGqK+vk se+prsY + t+++ +v kk+e+s+ d++++e +Y+g H h+
  Aqcoe2G051500.1.p 636 EDVYNWRKYGQKQVKCSEYPRSYDKYTHQNSQVNKKIECSH-DGQITELIYKGGHYHP 692
                        7***************************************9.***************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF520584.42E-35127377IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.9E-11136223IPR032675Leucine-rich repeat domain, L domain-like
PfamPF138551.2E-7153202IPR001611Leucine-rich repeat
Gene3DG3DSA:3.80.10.102.1E-12259497IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520584.42E-35408511IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:2.20.25.802.1E-17630693IPR003657WRKY domain
SuperFamilySSF1182903.92E-14632693IPR003657WRKY domain
SMARTSM007741.3E-15635693IPR003657WRKY domain
PROSITE profilePS5081114.837636694IPR003657WRKY domain
PfamPF031062.2E-13636692IPR003657WRKY domain
Gene3DG3DSA:1.25.10.104.5E-35848995IPR011989Armadillo-like helical
SuperFamilySSF483712.18E-32871995IPR016024Armadillo-type fold
SMARTSM001851.5E-6890932IPR000225Armadillo
PfamPF005141.8E-7891931IPR000225Armadillo
CDDcd000202.92E-8898990No hitNo description
PROSITE profilePS5017610.832902945IPR000225Armadillo
SMARTSM00185140933973IPR000225Armadillo
SMARTSM001853409751083IPR000225Armadillo
SuperFamilySSF483712.18E-3210471307IPR016024Armadillo-type fold
Gene3DG3DSA:1.25.10.104.5E-3510631261IPR011989Armadillo-like helical
SMARTSM001851.512231262IPR000225Armadillo
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1321 aa     Download sequence    Send to blast
MEKTTIGAYT SNCVDFLYLY PKDYEFYMDD IIHLWIAQGF FVQISSVLLA EEDDGRQYFD  60
MFESLKIIES SRVDPFTGRL RYKLNHSPFV DIRSPNNSNW NYYYYFRSDD TDSYISTNTL  120
HASIRDSFDP SFLKDLYQAK NLRTLLILHE YKSRLEQLPR DLFFKLPLLM ALELSHTSIK  180
ELPSSIRNLK DLRYLNLSFT PITTLPNSLC TLFNLQTLNL EGFGGLAELR TLPAFIVGKE  240
NGCHITELKQ MVNLRGTFRI LRLENVSSSN EARQAALEQK KYLNKLELHW SKLQDGLELL  300
ENLRPYKQIE ELEVLGYGGA KFPSWIGEPL FTKLTNITIH DCRNCKVLPP LGQLPSLESL  360
CISDMQAIKV IDRHFYGRNM GMESLDSDRL ELETASKHTS TASVCKAFPA LKNLTINGMP  420
MLEEWCGMED SDIPHLQNLN ISNCSKLTAL PKLSHLKFLK KLEISLDPSL QCFSKEGLPT  480
SLQYLVIIDC PLLKEKCLYD EEEYWQQFGY IPNIWIDYEQ MTKVSSASNQ TQNVEVADAS  540
HCSPAPVQAQ VDIECQAVFL KQTLTKGYAT GSPSTIEGAT KDSSYLPLGT SDTGAASEQA  600
PQLEEQVHVD DTGSQQLVEG DQGGAYPPTV TGRPSEDVYN WRKYGQKQVK CSEYPRSYDK  660
YTHQNSQVNK KIECSHDGQI TELIYKGGHY HPMAQPSCRS ASEMGSEESI EEELSFLILL  720
ADRVRKSVEE AKSFKNECFE VGKQVDCLLR MLRSTVCLTT SSSSLYERPI RRIVSEVSKN  780
LEQALTLVRR CKRSGILGRV VTISSATVFR KLFPLLDNSV VDMKWLLSVY DVVESNNGGG  840
GGGIVLSLPP IASNDPILSW VWSFTAVIQT SSSLIDRIEA ANQLALLAAD NDRNKKIIVE  900
EGGVPPLLKL LKEGVSAESQ VAASTALANL ATDQEWVRQI VAELGVLIIV QVLWDSPMLV  960
QTSVANLVSR MAENDSDAQE EFARENAIRP LVSLLLSDTL LLDEPKPPQS GKPTTLQSLV  1020
LLGVNSHEYP RTLHQHNVHL NSSLPSEDSS RGGNHKKERE NEKPEVKLQL KIKCAEALWL  1080
LSRGSLSNSQ RITETKGLLC LAKYIEKEQG GLQFNCLMTV MEIAGAAELN ADLRRAAFNT  1140
NSPAAKVVVD QMLRIIQEED TPSMQIPAIK VIGSLARAFR ARDTRVHGPL VTLVTQLDHR  1200
NLDVATEAVI ALGKFACPEN FLCVQHSNAI IEFGGVSALV RLLRVSERAQ LHGLILLCYL  1260
ALHMGNSEAL DWSKSLSALE GAARAPVSQH PLLRELIPKA IYQLDLYHEE DHPHRQSYGS  1320
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.17e-21WRKY family protein