PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G069000.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 692aa MW: 79024.8 Da PI: 9.1685

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G069000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.7	9.5e-19	62	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 +fY+eY+++ GFs+r+++ ++ + +++it+ +vCs+eg +++++ k + + r++++ r++Cka+++++k+k ++ +evt +e+ H+H Aqcoe2G069000.1.p 62 NFYREYGRKEGFSTRTRTIDRKqHGSNTITSCLLVCSREGVHNRREVKfggISGKPRNTSTVRCECKASMRLTKRKfEEIYEVTMVENTHSH 153 6************999877735677899999*******9999999888999999************9************* PP FAR1 88 ela 90 l+ Aqcoe2G069000.1.p 154 GLV 156 997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.4E-15	62	156	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	1.5E-25	272	356	IPR018289	MULE transposase domain

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence Send to blast
MDLSKDDDIN NLEPIDLSGD DGEPNRCANI GSPSNETPKK DTSKAETPHL GMTFKTVDDA 60 KNFYREYGRK EGFSTRTRTI DRKQHGSNTI TSCLLVCSRE GVHNRREVKF GGISGKPRNT 120 STVRCECKAS MRLTKRKFEE IYEVTMVENT HSHGLVSPCK RMNMRVNKCM PEAAKKLTMV 180 FHDEGLPVAK VASVFCGDTI GFTAKDCHNH FGSTRKKPKE GDATAVLHYF EKMSVEDPQF 240 YYAIQSDAKG RAVNFFWVDG RSRMQYEYFG DVVSFDTTYR TNAYKMPFAP FTGVNHHLMS 300 IQFGCGLLLD ETEGTFVWLF KTWLAAMGGR PPTSMITDQD KAMTSAIARV FLNTRMNTTG 360 RSESMNSYYD MFLKPTTALT DFVYSIDKLL RLIIKNERDF DYRTEHSSRI VGKDDFFLKH 420 AGKVYTLNVF GKFKSQWDKA KGVYKIYKEV SGDNGFSTYT LKSRNVNNPN FWNVIFNTST 480 LQGERECKYF SFMGLPCGHL LKVFWRHDID QIPDHFMMRR WTQKANTDRA MFEGGLVNGH 540 ETLEALRLTH GCRLATQLAF DASTHDEMYK YLVEKFDELS IEIAKRKETL NKSVNSEVAS 600 HQVSEELSIA DPSQVLLLNP NISQTKGRKE KTKVNDSGRI KRGIEISQEK KRRRCSCCQK 660 VVNHDLRTCP KNPNRKKKAT CTNDDHCLEK S*

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence Send to blast

MDLSKDDDIN NLEPIDLSGD DGEPNRCANI GSPSNETPKK DTSKAETPHL GMTFKTVDDA  60
KNFYREYGRK EGFSTRTRTI DRKQHGSNTI TSCLLVCSRE GVHNRREVKF GGISGKPRNT  120
STVRCECKAS MRLTKRKFEE IYEVTMVENT HSHGLVSPCK RMNMRVNKCM PEAAKKLTMV  180
FHDEGLPVAK VASVFCGDTI GFTAKDCHNH FGSTRKKPKE GDATAVLHYF EKMSVEDPQF  240
YYAIQSDAKG RAVNFFWVDG RSRMQYEYFG DVVSFDTTYR TNAYKMPFAP FTGVNHHLMS  300
IQFGCGLLLD ETEGTFVWLF KTWLAAMGGR PPTSMITDQD KAMTSAIARV FLNTRMNTTG  360
RSESMNSYYD MFLKPTTALT DFVYSIDKLL RLIIKNERDF DYRTEHSSRI VGKDDFFLKH  420
AGKVYTLNVF GKFKSQWDKA KGVYKIYKEV SGDNGFSTYT LKSRNVNNPN FWNVIFNTST  480
LQGERECKYF SFMGLPCGHL LKVFWRHDID QIPDHFMMRR WTQKANTDRA MFEGGLVNGH  540
ETLEALRLTH GCRLATQLAF DASTHDEMYK YLVEKFDELS IEIAKRKETL NKSVNSEVAS  600
HQVSEELSIA DPSQVLLLNP NISQTKGRKE KTKVNDSGRI KRGIEISQEK KRRRCSCCQK  660
VVNHDLRTCP KNPNRKKKAT CTNDDHCLEK S*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-62	FAR1-related sequence 5

Link Out ? help Back to Top
Phytozome	Aqcoe2G069000.1.p